RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 CD5LO43866 347 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 PLAUP00749 431 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 HLA-DRB1P01911 266 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 PSG1P11464 419 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 ZNF137PP52743 207 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 FOXA3P55318 350 aaPredicted RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 ARF6P62330 175 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 SSBP2P81877 361 aaPredicted RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 HIST1H1AQ02539 215 aaPredicted RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 GUSBP1Q15486 140 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 OCIAD2Q56VL3 154 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 MUC21Q5SSG8 566 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 LDLRAD2Q5SZI1 272 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 ATP1A1-AS1Q5TC04 95 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 ZNF841Q6ZN19 808 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 SLC25A48Q6ZT89 311 aaKnown RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 LINC00173Q6ZV60 143 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 DEFB125Q8N687 156 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 THAP8Q8NA92 274 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 C9orf106Q8NAJ2 232 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 C5orf17Q8NAS9 161 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 OR1B1Q8NGR6 318 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 OR10X1Q8NGY0 326 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 OSR1Q8TAX0 266 aaPredicted RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 BLNKQ8WV28 456 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 NPIPB3Q92617 1050 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 FMC1Q96HJ9 113 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 URB1-AS1Q96HZ7 61 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 GPR82Q96P67 336 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 GAFA1Q96PS6 74 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 MRPL20Q9BYC9 149 aaKnown RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 GFRA4Q9GZZ7 299 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 CST9LQ9H4G1 147 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 SCRT2Q9NQ03 307 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 NDUFA4L2Q9NRX3 87 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 RNF7Q9UBF6 113 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 PEF1Q9UBV8 284 aaKnown RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 RPUSD1Q9UJJ7 312 aaKnown RBP3.59□□□□□ -1.83
TNC-208ENST00000498724 RNF24Q9Y225 148 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 CFAP46Q8IYW2 2715 aa3.59□□□□□ -1.83
TNC-208ENST00000498724 DOCK10Q96BY6 2186 aa3.59□□□□□ -1.84
TNC-208ENST00000498724 MYO18BQ8IUG5 2567 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 BSNQ9UPA5 3926 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 AHCTF1Q8WYP5 2266 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 LOC102724200A0A096LPH7 203 aaPredicted RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 C19orf71A6NCJ1 209 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 OR2T8A6NH00 312 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 SRRM4A7MD48 611 aaKnown RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 H0Y8G0 127 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 K7EM74 188 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 K7ERU9 68 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 CRXO43186 299 aaPredicted RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 MOSP00540 346 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 LHBP01229 141 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 IGHG3P01860 377 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 IGKV1-16P04430 117 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 NBEAP1P0C6P0 100 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 ORM2P19652 201 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 HTR1DP28221 377 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 GPR183P32249 361 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 MYCNOSP40205 109 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 KIR2DL2P43627 348 aaPredicted RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 TNFAIP6P98066 277 aaPredicted RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 PSG9Q00887 426 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 RIGQ13278 110 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 SPRNQ5BIV9 151 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 PRR31Q5SQ13 230 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 FAM201AQ5SY85 155 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 AMMECR1LQ6DCA0 310 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 HIST2H2BCQ6DN03 193 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 VHLLQ6RSH7 139 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 PATE2Q6UY27 113 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 ZNF833PQ6ZTB9 187 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 LINC00305Q7Z4B0 112 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 Q86TA4 180 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 BPIFA4PQ86YQ2 179 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 FAM169BQ8N8A8 192 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 VSTM2AQ8TAG5 236 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 FAM222BQ8WU58 562 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 GTSF1Q8WW33 167 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 H1FXQ92522 213 aaKnown RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 RND1Q92730 232 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 SARAFQ96BY9 339 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 FLYWCH2Q96CP2 140 aaKnown RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 SGK494Q96LW2 274 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 CCL13Q99616 98 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 NDFIP1Q9BT67 221 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 TP73-AS1Q9UF72 201 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 ZNF835Q9Y2P0 537 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 KLF12Q9Y4X4 402 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 TIMM8BQ9Y5J9 83 aaPredicted RBP3.58□□□□□ -1.84
TNC-208ENST00000498724 SLC25A15Q9Y619 301 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 DOPEY2Q9Y3R5 2298 aa3.58□□□□□ -1.84
TNC-208ENST00000498724 IGKV1D-37A0A075B6S9 117 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms