RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 Q6ZSV7 163 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 STXBP6Q8NFX7 210 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 LINC00052Q96N35 136 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 OR5B12Q96R08 314 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 PAXXQ9BUH6 204 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SCRT1Q9BWW7 348 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SLC25A2Q9BXI2 301 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SLC25A39Q9BZJ4 359 aaPredicted RBP5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SLC35B3Q9H1N7 401 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 OR51M1Q9H341 326 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SMDT1Q9H4I9 107 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 MRPL27Q9P0M9 148 aaKnown RBP5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 RABAC1Q9UI14 185 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 ITPR3Q14573 2671 aa5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 MAP1AP78559 2803 aaPredicted RBP5.51□□□□□ -1.53
GPATCH4-209ENST00000498641 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 ABCA1O95477 2261 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 IGHV3OR16-8A0A075B7F1 116 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 C9JQL5 133 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 C11orf94C9JXX5 98 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 APOC3P02656 99 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 RPLP1P05386 114 aaKnown RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 PYYP10082 97 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 RPL15P61313 204 aaKnown RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 MEF2BQ02080 365 aaPredicted RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 KIAA0141Q14154 515 aaPredicted RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 USF2Q15853 346 aaPredicted RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF343Q6P1L6 599 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 TOMM20LQ6UXN7 152 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 LURAP1LQ8IV03 231 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 KLHDC1Q8N7A1 406 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 OR4F5Q8NH21 305 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 FAM167A-AS1Q96KT0 104 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 OR4F4Q96R69 305 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 C20orf24Q9BUV8 137 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 PEF1Q9UBV8 284 aaKnown RBP5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 RNF24Q9Y225 148 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 PLXNB1O43157 2135 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 VPS13CQ709C8 3753 aa5.5□□□□□ -1.53
GPATCH4-209ENST00000498641 ITPR2Q14571 2701 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF320A2RRD8 509 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF98A6NK75 572 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 H3BRN7 92 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 TCF21O43680 179 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 GGCTO75223 188 aaKnown RBP5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 CRLF1O75462 422 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 TRBV12-3P01733 135 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 SNRPCP09234 159 aaKnown RBP5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 NPPCP23582 126 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 KHDC1LQ5JSQ8 128 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 SOHLH1Q5JUK2 328 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 BPIFA4PQ86YQ2 179 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 CYB561D1Q8N8Q1 229 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 OR4F17Q8NGA8 305 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 BLNKQ8WV28 456 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF503Q96F45 646 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 METTL26Q96S19 204 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 TXNDC17Q9BRA2 123 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 SEC11CQ9BY50 192 aa5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 YTHDF2Q9Y5A9 579 aaKnown RBP5.49□□□□□ -1.53
GPATCH4-209ENST00000498641 NBPF19A0A087WUL8 3843 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 FAM74A7A6NL05 159 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 F6UZH7 168 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 NDUFA4O00483 81 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF207O43670 478 aaKnown RBP5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 PDE6DO43924 150 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 LGALS1P09382 135 aaKnown RBP5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 NBEAP1P0C6P0 100 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 ATP5G3P48201 142 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 CD81P60033 236 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 RANP62826 216 aaKnown RBP5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 FAM106AQ4KMX7 169 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 OR8I2Q8N0Y5 310 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 SUN5Q8TC36 379 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 FXYD5Q96DB9 178 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 UBE2E2Q96LR5 201 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 C16orf95Q9H693 158 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 TMEM14CQ9P0S9 112 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 NAV3Q8IVL0 2385 aa5.48□□□□□ -1.53
GPATCH4-209ENST00000498641 CSMD1Q96PZ7 3565 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 IGHV3-49A0A0A0MS15 119 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 IGHV3-66A0A0C4DH42 116 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 A0A1W2PRE2 83 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF785A8K8V0 405 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 TMEM250H0YL14 139 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 H3BTX0 84 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 NDUFA7O95182 113 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 HIST1H1EP10412 219 aaKnown RBP5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 GP9P14770 177 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 RPL7P18124 248 aaKnown RBP5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 ADCYAP1P18509 176 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 ATF4P18848 351 aaPredicted RBP5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 SUMO1P63165 101 aaKnown RBP5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 ZNF674Q2M3X9 581 aa5.47□□□□□ -1.53
GPATCH4-209ENST00000498641 RPEL1Q2QD12 228 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms