RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 C14orf166Q9Y224 244 aaKnown RBP10.29□□□□□ -0.76
TRAF4-212ENST00000498540 LINC00588Q9Y4M8 146 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 F5H768 121 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 SULT1A3P0DMM9 295 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 SULT1A4P0DMN0 295 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 TAS2R19P59542 299 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 OR2F1Q13607 317 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 GAMTQ14353 236 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 GPR107Q5VW38 600 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 STEAP1BQ6NZ63 245 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 OR8I2Q8N0Y5 310 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 LGI3Q8N145 548 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 TMEM229BQ8NBD8 167 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 PPP1R14BQ96C90 147 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 PRR13Q9NZ81 148 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 U3KQ87 197 aa10.28□□□□□ -0.76
TRAF4-212ENST00000498540 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 M0R2Z0 102 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 CRXO43186 299 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-212ENST00000498540 CCL18P55774 89 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 FCN2Q15485 313 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 DTD1Q8TEA8 209 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 C16orf92Q96LL3 132 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 RBKSQ9H477 322 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 EXTL2Q9UBQ6 330 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 TMEM56-RWDD3S4R434 201 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
TRAF4-212ENST00000498540 HERC1Q15751 4861 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 INSP01308 110 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 AZU1P20160 251 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 CNN1P51911 297 aaKnown RBP10.26□□□□□ -0.77
TRAF4-212ENST00000498540 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 BAP18Q8IXM2 172 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 OR11H7Q8NGC8 314 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 RNF141Q8WVD5 230 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 FUNDC2Q9BWH2 189 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 KRTAP1-5Q9BYS1 174 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 SLC25A32Q9H2D1 315 aa10.26□□□□□ -0.77
TRAF4-212ENST00000498540 SNRPGP15A8MWD9 76 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 TSPOP30536 169 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 GPX4P36969 197 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-212ENST00000498540 MEOX2P50222 304 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 MZT2AQ6P582 158 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 OR4C16Q8NGL9 310 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 SLC25A22Q9H936 323 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 VCX3AQ9NNX9 186 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 CACFD1Q9UGQ2 172 aa10.25□□□□□ -0.77
TRAF4-212ENST00000498540 IGKV1OR2-108A0A075B7D4 117 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 GABARAPH6UMI1 98 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 GABARAPO95166 117 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 ATP5G1P05496 136 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 FABP1P07148 127 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 GALR1P47211 349 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 ATP5G3P48201 142 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 SURF2Q15527 256 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-212ENST00000498540 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 SSX7Q7RTT5 188 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 IL22RA2Q969J5 263 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 TRGV9Q99603 122 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 RSG1Q9BU20 258 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 GPR132Q9UNW8 380 aa10.24□□□□□ -0.77
TRAF4-212ENST00000498540 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 A0A087WXM4 84 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 CCR6P51684 374 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 CLINT1Q14677 625 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 SMCO1Q147U7 214 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 Q9H8V8 135 aa10.23□□□□□ -0.77
TRAF4-212ENST00000498540 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 CBY3A6NI87 242 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 ZNF98A6NK75 572 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 DISC1C4P0D8 188 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
TRAF4-212ENST00000498540 LYZL2Q7Z4W2 148 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 THAP8Q8NA92 274 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 AP3S1Q92572 193 aa10.22□□□□□ -0.77
TRAF4-212ENST00000498540 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
TRAF4-212ENST00000498540 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-212ENST00000498540 A0A0B4J2A0 478 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 BOLA2-SMG1P6H3BVE0 249 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-212ENST00000498540 B2MP61769 119 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 SSBP1Q04837 148 aaKnown RBP10.21□□□□□ -0.77
TRAF4-212ENST00000498540 GPR141Q7Z602 305 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 UHRF2Q96PU4 802 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 SHPKQ9UHJ6 478 aa10.21□□□□□ -0.77
TRAF4-212ENST00000498540 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-212ENST00000498540 OR51S1Q8NGJ8 323 aa10.2□□□□□ -0.78
TRAF4-212ENST00000498540 LINC01587Q99440 93 aa10.2□□□□□ -0.78
TRAF4-212ENST00000498540 NAA50Q9GZZ1 169 aaKnown RBP10.2□□□□□ -0.78
TRAF4-212ENST00000498540 MIXL1Q9H2W2 232 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms