RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 C16orf47Q6ZP98 133 aaPredicted RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 SSX8Q7RTT4 187 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 ATP5L2Q7Z4Y8 100 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 LHFPL1Q86WI0 220 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 AMN1Q8IY45 258 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 SLC25A45Q8N413 288 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 SLC22A24Q8N4F4 322 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 RNF182Q8N6D2 247 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 APCDD1LQ8NCL9 501 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 LMX1AQ8TE12 382 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 MAL2Q969L2 176 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 BORCS8Q96FH0 119 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 DPY30Q9C005 99 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 GABARAPL1Q9H0R8 117 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 NPVFQ9HCQ7 196 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 AMMECR1Q9Y4X0 333 aaPredicted RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 PXMP4Q9Y6I8 212 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 CHD2O14647 1828 aaKnown RBP2.11□□□□□ -2.07
CALD1-224ENST00000498254 ITGB4P16144 1822 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 SCN4AP35499 1836 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 BRWD3Q6RI45 1802 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 CROCC2H7BZ55 1655 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 CCDC88AQ3V6T2 1871 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 ARAP2Q8WZ64 1704 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 PLXNB3Q9ULL4 1909 aa2.11□□□□□ -2.07
CALD1-224ENST00000498254 COL1A2P08123 1366 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 PARP14Q460N5 1801 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 MROH1Q8NDA8 1641 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 COL27A1Q8IZC6 1860 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 CDK5RAP2Q96SN8 1893 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 PLEKHH2Q8IVE3 1493 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 IGHV1-45A0A0A0MS14 117 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 C5orf49A4QMS7 147 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 A6NED7 52 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 OR2T8A6NH00 312 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 IGLL5B9A064 214 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 CDC42EP2O14613 210 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 TAX1BP3O14907 124 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 GSTZ1O43708 216 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 DEDDO75618 318 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 MT-ATP8P03928 68 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 IFITM1P13164 125 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 HIST1H1DP16402 221 aaKnown RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 ADCYAP1P18509 176 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 RPS4Y1P22090 263 aaKnown RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 ZNF93P35789 620 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 CCR2P41597 374 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 RPS24P62847 133 aaKnown RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 FKBP1AP62942 108 aaKnown RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 HERVK_113P63121 156 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 LGALSLQ3ZCW2 172 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 LCN8Q6JVE9 175 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 LRP11Q86VZ4 500 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 OR4K13Q8NH42 304 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 OR4A5Q8NH83 315 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 KLF14Q8TD94 323 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 BRK1Q8WUW1 75 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 PSMF1Q92530 271 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 TSLPQ969D9 159 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 SLC25A21Q9BQT8 299 aaPredicted RBP2.1□□□□□ -2.07
CALD1-224ENST00000498254 SHANK2-AS3Q9BTD1 123 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 SEC11CQ9BY50 192 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 OTORQ9NRC9 128 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 ANAPC10Q9UM13 185 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 IER3IP1Q9Y5U9 82 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 ICOSQ9Y6W8 199 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 DIP2AQ14689 1571 aa2.1□□□□□ -2.07
CALD1-224ENST00000498254 SHROOM2Q13796 1616 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 ABCA9Q8IUA7 1624 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MADDQ8WXG6 1647 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 NUP210Q8TEM1 1887 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 PTPRFP10586 1907 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MYH6P13533 1939 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 A2ML1A8K2U0 1454 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 KNDC1Q76NI1 1749 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 A0A1B0GUL6 1792 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 DISP1Q96F81 1524 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 IGHV3-43A0A0B4J1X8 118 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 IGLC7A0M8Q6 106 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MEIS3P1A6NDR6 274 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 OR4C45A6NMZ5 311 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 ZNF705FA8MVS1 300 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 G3V3Q6 166 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 K7EP34 96 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 PIRO00625 290 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 RER1O15258 196 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 LYZL6O75951 148 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 IGHG2P01859 326 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 MT-ND6P03923 174 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 ZNF705DP0CH99 300 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 ZNF705BP0CI00 300 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 SRP14P37108 136 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms