RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TEX36Q5VZQ5 186 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 SLC25A48Q6ZT89 311 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 LINC00518Q8N0U6 118 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 ZNF383Q8NA42 475 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 NABP2Q9BQ15 211 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 MRPL32Q9BYC8 188 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 VENTXO95231 258 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 IL6RP08887 468 aaPredicted RBP6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 TRGV3P03979 118 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 ARL14EPLP0DKL9 152 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 SAPCD1Q5SSQ6 148 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 SELENOKQ9Y6D0 94 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 TNRC6AQ8NDV7 1962 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 KIAA1549Q9HCM3 1950 aa6.53□□□□□ -1.36
HLA-DMB-262ENST00000498020 LEPROTL1O95214 131 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 IL4P05112 153 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TREML4Q6UXN2 200 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM144Q7Z5S9 345 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 SRSF12Q8WXF0 261 aaKnown RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 DSCAMO60469 2012 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 SAA1P0DJI8 122 aaPredicted RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 NUTF2P61970 127 aaKnown RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 KLRD1Q13241 179 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 CACNG8Q8WXS5 425 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGKV1D-33P01593 117 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGKV1-33P01594 117 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 CRYBB3P26998 211 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 HSPB9Q9BQS6 159 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TGIF2-C20orf24A0A0A6YYL0 155 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 REG1AP05451 166 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 PRSS2P07478 247 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 MDKP21741 143 aaPredicted RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 GCHFRP30047 84 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF134P52741 427 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 WDR25Q64LD2 544 aaPredicted RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM200BQ69YZ2 307 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 RAB37Q96AX2 223 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM242Q9NWH2 141 aa6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF256Q9Y2P7 627 aaPredicted RBP6.52□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 TRGC2P03986 189 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 AGAP20933 346 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 PKIAP61925 76 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 RUSC1-AS1Q66K80 236 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 DYSFO75923 2080 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 NUDT3O95989 172 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGFBP2P18065 325 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 FAM90A2PQ658T7 463 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 ERASQ7Z444 233 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 PRSS47A8MTI9 375 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 SPRNQ5BIV9 151 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 GOLT1AQ6ZVE7 132 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 C5orf30Q96GV9 206 aa6.51□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV3OR16-8A0A075B7F1 116 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 A0A1B0GWJ7 208 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 POU2AF1Q16633 256 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 DUX4L9Q6RFH8 374 aaPredicted RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 ODF3L1Q8IXM7 274 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 TNFRSF14Q92956 283 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 S4R3C0 116 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 H3BVH4 76 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 P0C879 139 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 GPX4P36969 197 aaPredicted RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 FAM71F2Q6NXP2 309 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 KIR3DL3Q8N743 410 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 GPR82Q96P67 336 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 SMR3AQ99954 134 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM133Q9H2Q1 129 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 FNDC10F2Z333 226 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV3-48P01763 117 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 STAG3L3P0CL85 134 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 TDGF1P3P51864 188 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 DLX6P56179 175 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 FOXL1Q12952 345 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 KLHL30-AS1Q8NEE0 82 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 RNASEH2CQ8TDP1 164 aaKnown RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 FBXL15Q9H469 300 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 PCSK5Q92824 1860 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms