RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ERG28Q9UKR5 140 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 SNURFLB1AK76 121 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 CD5LO43866 347 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 NPVFQ9HCQ7 196 aa9.31□□□□□ -0.92
SNRNP200-208ENST00000497539 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 ACTL6BO94805 426 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 TCL1AP56279 114 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 TMEM167AQ8TBQ9 72 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 TLN1Q9Y490 2541 aaKnown RBP9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 IGLV1-47P01700 117 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 FXYD3Q14802 87 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 ITLN2Q8WWU7 325 aaPredicted RBP9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 GNB4Q9HAV0 340 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 WASHC3Q9Y3C0 194 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 LSM4Q9Y4Z0 139 aaKnown RBP9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 DMXL2Q8TDJ6 3036 aa9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 TET2Q6N021 2002 aaPredicted RBP9.3□□□□□ -0.92
SNRNP200-208ENST00000497539 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 IGKV1-16P04430 117 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 OPRK1P41145 380 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 OR8B3Q8NGG8 313 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 VSTM2AQ8TAG5 236 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 ZNF418Q8TF45 676 aaPredicted RBP9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 OR8B2Q96RD0 313 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 IGLV2-23P01705 113 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 IGFBP2P18065 325 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 PMCHP20382 165 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 USF1P22415 310 aaPredicted RBP9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 ERASQ7Z444 233 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 OR1L8Q8NGR8 309 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 BLNKQ8WV28 456 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 PTH2Q96A98 100 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 C1orf159Q96HA4 380 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 ZNRD1Q9P1U0 126 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 ATMQ13315 3056 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
SNRNP200-208ENST00000497539 TEX50A0A1B0GTY4 177 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 CXorf1O96002 111 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 MYOD1P15172 320 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 NPY1RP25929 384 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 GCHFRP30047 84 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 ATOH7Q8N100 152 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 SIGLECL1Q8N7X8 197 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 CACNA1AO00555 2505 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 LAMA5O15230 3695 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 AMTP48728 403 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 LGALS4P56470 323 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 PRR31Q5SQ13 230 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 FOXI2Q6ZQN5 318 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 FAM19A2Q8N3H0 131 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 NPFFR1Q9GZQ6 430 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 WNT10AQ9GZT5 417 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 NDUFA4L2Q9NRX3 87 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 VPREB3Q9UKI3 123 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 SMG1Q96Q15 3661 aaKnown RBP9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 RNF183Q96D59 192 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 PLEKHA3Q9HB20 300 aa9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 AMMECR1Q9Y4X0 333 aaPredicted RBP9.28□□□□□ -0.92
SNRNP200-208ENST00000497539 F8WDY8 70 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 GPX1P07203 203 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 PVRIGQ6DKI7 326 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 NCOR2Q9Y618 2525 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 M0R1W7 72 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 CA2P00918 260 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 IGHG4P01861 327 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 GATA2P23769 480 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 CRYBB3P26998 211 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 HIST1H1AQ02539 215 aaPredicted RBP9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 RPEL1Q2QD12 228 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 PQLC2Q6ZP29 291 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 RNF5Q99942 180 aa9.27□□□□□ -0.93
SNRNP200-208ENST00000497539 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms