RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 OR1L6Q8NGR2 347 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 IGKV1D-37A0A075B6S9 117 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 FBXL7Q9UJT9 491 aa13.22□□□□□ -0.29
LMNA-216ENST00000496738 LYPD6BQ8NI32 183 aa13.21□□□□□ -0.29
LMNA-216ENST00000496738 M0R036 132 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 HMGB3O15347 200 aaKnown RBP13.21□□□□□ -0.3
LMNA-216ENST00000496738 CD99P14209 185 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 ZNF726P1Q15940 193 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 OR10G4Q8NGN3 311 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 NUDT11Q96G61 164 aa13.21□□□□□ -0.3
LMNA-216ENST00000496738 IGF1P05019 195 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 SELENOTP62341 195 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 TMEM116Q8NCL8 245 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 SLC45A2Q9UMX9 530 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
LMNA-216ENST00000496738 DNAJC9-AS1A6NH13 148 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 CYB5BO43169 146 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 RHOGP84095 191 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
LMNA-216ENST00000496738 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
LMNA-216ENST00000496738 LINC00869P0C866 280 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 LCN15Q6UWW0 184 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 RCC1LQ96I51 464 aaKnown RBP13.19□□□□□ -0.3
LMNA-216ENST00000496738 THYN1Q9P016 225 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 PUS1Q9Y606 427 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMNA-216ENST00000496738 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 GCGP01275 180 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 SRD5A1P18405 259 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 RPL29P47914 159 aaKnown RBP13.19□□□□□ -0.3
LMNA-216ENST00000496738 CRIP2P52943 208 aaPredicted RBP13.19□□□□□ -0.3
LMNA-216ENST00000496738 FGF8P55075 233 aaPredicted RBP13.19□□□□□ -0.3
LMNA-216ENST00000496738 PRR20EP86478 221 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 PRR20CP86479 221 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 PRR20DP86480 221 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 PRR20BP86481 221 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 PRR20AP86496 221 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 OR5I1Q13606 314 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 C15orf32Q32M92 178 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 ESM1Q9NQ30 184 aa13.19□□□□□ -0.3
LMNA-216ENST00000496738 OR2C1O95371 312 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 ACOT6Q3I5F7 207 aaPredicted RBP13.18□□□□□ -0.3
LMNA-216ENST00000496738 TIGITQ495A1 244 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 Q56UQ5 140 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 LCNL1Q6ZST4 164 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 OR4X1Q8NH49 305 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 CBY3A6NI87 242 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 ZNF329Q86UD4 541 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 KCNIP2Q9NS61 270 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
LMNA-216ENST00000496738 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 C20orf202A1L168 122 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 CCL20P78556 96 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 C20orf24Q9BUV8 137 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 PRSS22Q9GZN4 317 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 GNG7O60262 68 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 IGLC1P0CG04 106 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
LMNA-216ENST00000496738 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
LMNA-216ENST00000496738 OR2T8A6NH00 312 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 F8W735 103 aaPredicted RBP13.16□□□□□ -0.3
LMNA-216ENST00000496738 TRGV3P03979 118 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 CDC34P49427 236 aaPredicted RBP13.16□□□□□ -0.3
LMNA-216ENST00000496738 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 TRGV9Q99603 122 aa13.16□□□□□ -0.3
LMNA-216ENST00000496738 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
LMNA-216ENST00000496738 PF4V1P10720 104 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 S100A7P31151 101 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 MFAP4P55083 255 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 TPPP2P59282 170 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 SPSB3Q6PJ21 355 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 COMMD1Q8N668 190 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 MAP1LC3B2A6NCE7 125 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 NECAP1Q8NC96 275 aa13.15□□□□□ -0.3
LMNA-216ENST00000496738 MAP1LC3BQ9GZQ8 125 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms