RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PRSS46E5RG02 174 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 ADAP1O75689 374 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 OR4E1P0C645 316 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 HLA-DMBP28068 263 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 PSMB3P49720 205 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 CNPY1Q3B7I2 92 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 BPIFCQ8NFQ6 507 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
PTPRF-214ENST00000496043 WDR12Q9GZL7 423 aaKnown RBP9.22□□□□□ -0.93
PTPRF-214ENST00000496043 PSENENQ9NZ42 101 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 FLVCR2Q9UPI3 526 aa9.22□□□□□ -0.93
PTPRF-214ENST00000496043 A6NHS1 94 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 IGLL5B9A064 214 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 ISLRO14498 428 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 ORM2P19652 201 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 GALR1P47211 349 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 MEOX2P50222 304 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.94
PTPRF-214ENST00000496043 C4orf46Q504U0 113 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 FOXI2Q6ZQN5 318 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 TMEM144Q7Z5S9 345 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 SMIM8Q96KF7 97 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 CLUHP3Q96NS8 147 aa9.21□□□□□ -0.94
PTPRF-214ENST00000496043 SAV1Q9H4B6 383 aaPredicted RBP9.21□□□□□ -0.94
PTPRF-214ENST00000496043 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF98A6NK75 572 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 H3BP45 60 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 SOCS3O14543 225 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 IGKV3-20P01619 116 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 GATA2P23769 480 aaPredicted RBP9.2□□□□□ -0.94
PTPRF-214ENST00000496043 AKR1C1Q04828 323 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 OR4D5Q8NGN0 318 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 GPR82Q96P67 336 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 NEU1Q99519 415 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 SDHCQ99643 169 aaPredicted RBP9.2□□□□□ -0.94
PTPRF-214ENST00000496043 RSG1Q9BU20 258 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 TMEM147Q9BVK8 224 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 SLC25A22Q9H936 323 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
PTPRF-214ENST00000496043 SMCO3A2RU48 225 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 SMIM9A6NGZ8 99 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 IL5P05113 134 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 ANXA7P20073 488 aaKnown RBP9.19□□□□□ -0.94
PTPRF-214ENST00000496043 FXYD7P58549 80 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 DEFB1P60022 68 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 TMEM182Q6ZP80 229 aaPredicted RBP9.19□□□□□ -0.94
PTPRF-214ENST00000496043 Q6ZTC4 211 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 RPP25LQ8N5L8 163 aaKnown RBP9.19□□□□□ -0.94
PTPRF-214ENST00000496043 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 NDUFA13Q9P0J0 144 aa9.19□□□□□ -0.94
PTPRF-214ENST00000496043 SSSCA1O60232 199 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 DEDDO75618 318 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 IL7P13232 177 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 PSG9Q00887 426 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 C12orf74Q32Q52 190 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF705AQ6ZN79 300 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-214ENST00000496043 CYP2G1PQ6ZSU1 146 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 ACOT7LQ6ZUV0 252 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 SLC25A32Q9H2D1 315 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 NPVFQ9HCQ7 196 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 GSKIPQ9P0R6 139 aa9.18□□□□□ -0.94
PTPRF-214ENST00000496043 IGHV3OR16-12A0A075B7B8 117 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 A0A0J9YX75 114 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 TMEM189A5PLL7 270 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 PMS2P5A8MQ11 134 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 HYPMO75409 117 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 BTCP35070 178 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 PAX9P55771 341 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 TAS2R30P59541 319 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 RAP2BP61225 183 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 SELENOTP62341 195 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 DLK1P80370 383 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 IAH1Q2TAA2 248 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-214ENST00000496043 FAM78BQ5VT40 261 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 GSG1LQ6UXU4 331 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 S100A7AQ86SG5 101 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 OR10P1Q8NGE3 313 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
PTPRF-214ENST00000496043 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF705FA8MVS1 300 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 F6UB75 175 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 SCGB1D2O95969 90 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 METTL15P1P0C7V9 234 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF705DP0CH99 300 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF705BP0CI00 300 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 SPART-AS1P0CW21 52 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 RRAS2P62070 204 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 TMEM14EPQ6UXP3 125 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 ZBTB8BQ8NAP8 495 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms