RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 SRRQ9GZT4 340 aa12.23□□□□□ -0.45
APOBEC3A-204ENST00000495988 MAGT1Q9H0U3 335 aa12.23□□□□□ -0.45
APOBEC3A-204ENST00000495988 PTTG2Q9NZH5 202 aa12.23□□□□□ -0.45
APOBEC3A-204ENST00000495988 IGKV1OR2-108A0A075B7D4 117 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 SYNGR2O43760 224 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 PSMB3P49720 205 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 TRIQKQ629K1 86 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 OR8I2Q8N0Y5 310 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 SAV1Q9H4B6 383 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 CELA1Q9UNI1 258 aa12.22□□□□□ -0.45
APOBEC3A-204ENST00000495988 INPP1P49441 399 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 FXYD7P58549 80 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 GGNBP1Q5YKI7 109 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 GSG1LQ6UXU4 331 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.45
APOBEC3A-204ENST00000495988 IGHV4-4A0A075B6R2 117 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 PRSS46E5RG02 174 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 SOCS3O14543 225 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 SPANXN5Q5MJ07 72 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
APOBEC3A-204ENST00000495988 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 H3BP45 60 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 LINC00299Q6ZSB3 139 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 NEU1Q99519 415 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 FRAS1Q86XX4 4008 aa12.19□□□□□ -0.46
APOBEC3A-204ENST00000495988 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 C9orf170A2RU37 121 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 ISLRO14498 428 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 ADAP1O75689 374 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 BPIFCQ8NFQ6 507 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 RNF126Q9BV68 326 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 SLC25A32Q9H2D1 315 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 SLC45A2Q9UMX9 530 aa12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 STRAPQ9Y3F4 350 aaKnown RBP12.18□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF705FA8MVS1 300 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 F6UB75 175 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 ORM2P19652 201 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 GALR1P47211 349 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 MEOX2P50222 304 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 SAMD13Q5VXD3 122 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 ACOT7LQ6ZUV0 252 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF709Q8N972 641 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 S100ZQ8WXG8 99 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 C16orf92Q96LL3 132 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 CLUHP3Q96NS8 147 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 SLC35B3Q9H1N7 401 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
APOBEC3A-204ENST00000495988 TMEM189A5PLL7 270 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 NAP1L6A6NFF2 107 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 NDUFB6O95139 128 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 AMBPP02760 352 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 EMP1P54849 157 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 PAX9P55771 341 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 PSG9Q00887 426 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 BAK1Q16611 211 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 FAM78BQ5VT40 261 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 SDHCQ99643 169 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 RSG1Q9BU20 258 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
APOBEC3A-204ENST00000495988 A0A0J9YX75 114 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 SMCO3A2RU48 225 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 IL7P13232 177 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 ID3Q02535 119 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 OR1B1Q8NGR6 318 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 C20orf173Q96LM9 149 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 PSENENQ9NZ42 101 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 VPS13DQ5THJ4 4388 aa12.15□□□□□ -0.46
APOBEC3A-204ENST00000495988 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 IFNA21P01568 189 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 S100A7P31151 101 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 TMEM144Q7Z5S9 345 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 GPR82Q96P67 336 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 CCDC32Q9BV29 185 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 DOK5Q9P104 306 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 DNAH10Q8IVF4 4471 aa12.14□□□□□ -0.47
APOBEC3A-204ENST00000495988 SSSCA1O60232 199 aa12.13□□□□□ -0.47
APOBEC3A-204ENST00000495988 OR4E1P0C645 316 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms