RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 C21orf62Q9NYP8 219 aa6.8□□□□□ -1.32
EPHA4-213ENST00000495693 AKAP13Q12802 2813 aa6.8□□□□□ -1.32
EPHA4-213ENST00000495693 ANKRD11Q6UB99 2663 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 DIDO1Q9BTC0 2240 aaKnown RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 TRBV6-1A0A0K0K1D8 114 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 A0A0U1RQK1 487 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 A0A1W2PPR1 153 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 ZNF320A2RRD8 509 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 C19orf84I3L1E1 186 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 K7EIM0 57 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 BMPR1BO00238 502 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 IGHV4-39P01824 125 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 SLC25A5P05141 298 aaKnown RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 TRGC1P0CF51 173 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 PSG1P11464 419 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 SAA4P35542 130 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 MFAP2P55001 183 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 PSG9Q00887 426 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 PAX8Q06710 450 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 RNF151Q2KHN1 245 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 CT83Q5H943 113 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 PATE2Q6UY27 113 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 ZNF329Q86UD4 541 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 C10orf105Q8TEF2 133 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 RNF125Q96EQ8 232 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 GPR82Q96P67 336 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 TBX15Q96SF7 602 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 C12orf57Q99622 126 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 DERL1Q9BUN8 251 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 SLC25A39Q9BZJ4 359 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 MRPL27Q9P0M9 148 aaKnown RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 EPDR1Q9UM22 224 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 MOB4Q9Y3A3 225 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 TRAPPC1Q9Y5R8 145 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 SOX21Q9Y651 276 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-213ENST00000495693 BSNQ9UPA5 3926 aa6.79□□□□□ -1.32
EPHA4-213ENST00000495693 TRBV20OR9-2A0A075B6H5 130 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 A0A1W2PRD5 423 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 A0A1W2PRF3 423 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 A0A1W2PRM7 423 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 H3BRN7 92 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 H3BUA1 57 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 FCN1O00602 326 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 ZNF253O75346 499 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 GP9P14770 177 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 RPL7P18124 248 aaKnown RBP6.78□□□□□ -1.32
EPHA4-213ENST00000495693 MYCNOSP40205 109 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 ATP5J2P56134 94 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 SSBP2P81877 361 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-213ENST00000495693 Q56UQ5 140 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 TMEM183AQ8IXX5 376 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 Q8N9W7 124 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 IGF2BP2-AS1Q96M15 143 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 SHANK2-AS3Q9BTD1 123 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 ELOVL1Q9BW60 279 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 AAMDCQ9H7C9 122 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
EPHA4-213ENST00000495693 ICE1Q9Y2F5 2266 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 TRBV7-1A0A0A6YYK4 115 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 IGHV7-81A0A0B4J1V7 117 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 IGHV1-69DA0A0B4J2H0 117 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 CENPVL3A0A0U1RRI6 287 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 WI2-2373I1.2A0A1W2PRP0 233 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 PGPA6NDG6 321 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ZNF705GA8MUZ8 300 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 B4DSR2 109 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 GATCO43716 136 aaKnown RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 BRI3O95415 125 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 IGHV1-69P01742 117 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 HLA-DQA1P01909 254 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 PYYP10082 97 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 MGST1P10620 155 aaKnown RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 COX6B1P14854 86 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 CSN1S1P47710 185 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 RELQ04864 619 aaPredicted RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 LDLRAD2Q5SZI1 272 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ZNF600Q6ZNG1 722 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ATP5L2Q7Z4Y8 100 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 OR4B1Q8NGF8 309 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 FRZBQ92765 325 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 EEF1AKMT3Q96AZ1 226 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 GNB1LQ9BYB4 327 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 Q9H3A6 140 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ZMAT4Q9H898 229 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 CLEC5AQ9NY25 188 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 MRPL36Q9P0J6 103 aaKnown RBP6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ZNF492Q9P255 531 aa6.77□□□□□ -1.33
EPHA4-213ENST00000495693 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms