RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, human

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN1-206	ENST00000495462	CTDSPL	O15194	276 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	RTL8C	O15255	209 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	B3GALNT1	O75752	331 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	PRM2	P04554	102 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	PRB4	P10163	310 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	SLC25A4	P12235	298 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	HLA-DRB4	P13762	266 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	AKR1C4	P17516	323 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	EMP1	P54849	157 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	OR2F1	Q13607	317 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	IL18	Q14116	193 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	GAMT	Q14353	236 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	SURF2	Q15527	256 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	SIGLEC15	Q6ZMC9	328 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	ZNF709	Q8N972	641 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	DTD1	Q8TEA8	209 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	RNF125	Q96EQ8	232 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	DIRAS2	Q96HU8	199 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	SOST	Q9BQB4	213 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	KRTAP9-8	Q9BYQ0	159 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	SLC35B3	Q9H1N7	401 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	NRN1	Q9NPD7	142 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	HSPB7	Q9UBY9	170 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	HLA-DRB4	X5D2U9	266 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	HSPG2	P98160	4391 aa		4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	APOB	P04114	4563 aa	Known RBP	4.6	□□□□□ -1.67
RPN1-206	ENST00000495462	DNAH5	Q8TE73	4624 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	IGHV3OR16-12	A0A075B7B8	117 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	PITX3	O75364	302 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	IFNA10	P01566	189 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	ZNF705D	P0CH99	300 aa	Predicted RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	ZNF705B	P0CI00	300 aa	Predicted RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	AKAIN1	P0CW23	69 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	SULT1A3	P0DMM9	295 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	SULT1A4	P0DMN0	295 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	TCTA	P57738	103 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	SSBP1	Q04837	148 aa	Known RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	KLF9	Q13886	244 aa	Predicted RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	TMEM41B	Q5BJD5	291 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	GPR141	Q7Z602	305 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	LGI3	Q8N145	548 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	C1orf158	Q8N1D5	194 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	NARS2	Q96I59	477 aa	Known RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	LINC00052	Q96N35	136 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	RNF126	Q9BV68	326 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	PBDC1	Q9BVG4	233 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	SLIRP	Q9GZT3	109 aa	Known RBP	4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	TMPRSS5	Q9H3S3	457 aa		4.59	□□□□□ -1.67
RPN1-206	ENST00000495462	IGLV2-18	A0A075B6J9	118 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462		A0A0B4J2A0	478 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	PRSS46	E5RG02	174 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	GSTZ1	O43708	216 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	AMBP	P02760	352 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	IAPP	P10997	89 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	GATA2	P23769	480 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	TNFSF8	P32971	234 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	NKX2-1	P43699	371 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	EIF2B2	P49770	351 aa	Known RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	CCR6	P51684	374 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	AP2S1	P53680	142 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	LYZ	P61626	148 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	SNRPD3	P62318	126 aa	Known RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	MRPS10	P82664	201 aa	Known RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	SMCO1	Q147U7	214 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	ZNF79	Q15937	498 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	FAM78B	Q5VT40	261 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	IGFL4	Q6B9Z1	124 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	ETFRF1	Q6IPR1	90 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	POM121L12	Q8N7R1	296 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	OR4B1	Q8NGF8	309 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	C15orf40	Q8WUR7	153 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	IL22RA2	Q969J5	263 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	PRRT1	Q99946	306 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	MRPS26	Q9BYN8	205 aa	Known RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	MAGT1	Q9H0U3	335 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	SAV1	Q9H4B6	383 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	MCUB	Q9NWR8	336 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	DKK2	Q9UBU2	259 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	SHPK	Q9UHJ6	478 aa		4.58	□□□□□ -1.68
RPN1-206	ENST00000495462	ZFP92	A6NM28	416 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462		H3BMQ9	156 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	SCGB2A1	O75556	95 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	FAM222A	Q5U5X8	452 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	AMTN	Q6UX39	209 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462		Q6ZSN1	163 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	TMED4	Q7Z7H5	227 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	OR1S1	Q8NH92	325 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	TRIM63	Q969Q1	353 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	C16orf92	Q96LL3	132 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	NEU1	Q99519	415 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	SLC25A32	Q9H2D1	315 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	SEPSECS	Q9HD40	501 aa	Known RBP	4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	CCDC59	Q9P031	241 aa	Known RBP	4.57	□□□□□ -1.68
RPN1-206	ENST00000495462	KCNIP3	Q9Y2W7	256 aa		4.57	□□□□□ -1.68
RPN1-206	ENST00000495462		U3KQ87	197 aa		4.57	□□□□□ -1.68

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