RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 COX19Q49B96 90 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 MBD6Q96DN6 1003 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 Q9H3A6 140 aa8.9□□□□□ -0.98
CHMP3-209ENST00000494623 POLR3KQ9Y2Y1 108 aaPredicted RBP8.9□□□□□ -0.98
CHMP3-209ENST00000494623 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 BMPR1BO00238 502 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 TOX4O94842 621 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 ESDP10768 282 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 KLF17Q5JT82 389 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-209ENST00000494623 S4R3C0 116 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 NBR2O15453 112 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 HLA-DQA1P01909 254 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 HIST1H1EP10412 219 aaKnown RBP8.89□□□□□ -0.99
CHMP3-209ENST00000494623 PLP1P60201 277 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 SIGLECL1Q8N7X8 197 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 GPR82Q96P67 336 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 SLC25A39Q9BZJ4 359 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-209ENST00000494623 BRS3P32247 399 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 CAMPP49913 170 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 TOMM20LQ6UXN7 152 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 OR11H6Q8NGC7 330 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 RCHY1Q96PM5 261 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 ATG101Q9BSB4 218 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 KLF12Q9Y4X4 402 aa8.89□□□□□ -0.99
CHMP3-209ENST00000494623 TCRAP04437 139 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 GPX1P07203 203 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 PRB4P10163 310 aaPredicted RBP8.88□□□□□ -0.99
CHMP3-209ENST00000494623 CDKN1AP38936 164 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 PAX2Q02962 417 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 SLAQ13239 276 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 MAJINQ3KP22 176 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 FBLN7Q53RD9 439 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 PRR31Q5SQ13 230 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 LINC00322Q6ZN03 302 aaPredicted RBP8.88□□□□□ -0.99
CHMP3-209ENST00000494623 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 C5orf17Q8NAS9 161 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 CFHR4Q92496 578 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 NEU1Q99519 415 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 A6NNC1 897 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 K7EIM0 57 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 CEACAM3P40198 252 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 TDRG1Q3Y452 100 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 OR10J3Q5JRS4 329 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 GDF5OSQ5U4N7 250 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 VN1R17PQ8TDU5 208 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 TSKUQ8WUA8 353 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 CHRDL1Q9BU40 450 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
CHMP3-209ENST00000494623 TRAV8-1A0A0A6YYK1 113 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 A0A1W2PS18 150 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 PMCHP20382 165 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 TCF24Q7RTU0 167 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 NEU4Q8WWR8 484 aaPredicted RBP8.87□□□□□ -0.99
CHMP3-209ENST00000494623 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 NCBP2LA6PVI3 153 aaKnown RBP8.87□□□□□ -0.99
CHMP3-209ENST00000494623 VWC2LB2RUY7 222 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 TOMM40O96008 361 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 PRTN3P24158 256 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 GPR6P46095 362 aaPredicted RBP8.87□□□□□ -0.99
CHMP3-209ENST00000494623 AMTP48728 403 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 KRTDAPP60985 99 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 C11orf71Q6IPW1 123 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 FMC1Q96HJ9 113 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
CHMP3-209ENST00000494623 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
CHMP3-209ENST00000494623 MRPL27Q9P0M9 148 aaKnown RBP8.87□□□□□ -0.99
CHMP3-209ENST00000494623 HRNRQ86YZ3 2850 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-209ENST00000494623 C17orf77Q96MU5 243 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 FBXL7Q9UJT9 491 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 TBL2Q9Y4P3 447 aaKnown RBP8.86□□□□□ -0.99
CHMP3-209ENST00000494623 M0R1W7 72 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 NDUFS7O75251 213 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 G0S2P27469 103 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 GOLT1AQ6ZVE7 132 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 FAM19A2Q8N3H0 131 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 NPBQ8NG41 125 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 DAZAP1Q96EP5 407 aaKnown RBP8.86□□□□□ -0.99
CHMP3-209ENST00000494623 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
CHMP3-209ENST00000494623 NRN1Q9NPD7 142 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
CHMP3-209ENST00000494623 LTAP01374 205 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 P01737 135 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-209ENST00000494623 NHLH1Q02575 133 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 C5orf64Q2M2E5 130 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 VMO1Q7Z5L0 202 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 PRNTQ86SH4 94 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 DYNAPQ8N1N2 210 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 CIARTQ8N365 385 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-209ENST00000494623 KIR3DL3Q8N743 410 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms