RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ANKRD7Q92527 254 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 AIF1LQ9BQI0 150 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 TMEM109Q9BVC6 243 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 PECRQ9BY49 303 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 MED28Q9H204 178 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 OR51I1Q9H343 314 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 PROK2Q9HC23 129 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 FKBP14Q9NWM8 211 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 YLPM1P49750 1951 aaKnown RBP1.97□□□□□ -2.09
SMC4-224ENST00000494612 SONP18583 2426 aaKnown RBP1.97□□□□□ -2.09
SMC4-224ENST00000494612 USF3Q68DE3 2245 aa1.97□□□□□ -2.09
SMC4-224ENST00000494612 TLN2Q9Y4G6 2542 aa1.96□□□□□ -2.09
SMC4-224ENST00000494612 FREM3P0C091 2139 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 A0A096LNT2 108 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 A0A1B0GU33 70 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 LECT2O14960 151 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 KRT75O95678 551 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 TCRBP04435 133 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 IFNA6P05013 189 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 OGNP20774 298 aaKnown RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 DDTP30046 118 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 MARCKSL1P49006 195 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 EFNA4P52798 201 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 FABP5Q01469 135 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 BSPH1Q075Z2 132 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 EBPQ15125 230 aaKnown RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 BATFQ16520 125 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 NCMAPQ5T1S8 102 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 LRRC34Q8IZ02 419 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 GPR32P1Q8NGA4 272 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 OR2V1Q8NHB1 315 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 FNDC9Q8TBE3 224 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 C10orf105Q8TEF2 133 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 ZNF418Q8TF45 676 aaPredicted RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 DGCR14Q96DF8 476 aaKnown RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 MS4A6EQ96DS6 147 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 B9D2Q9BPU9 175 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 RNF122Q9H9V4 155 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 PARVBQ9HBI1 364 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 ZNF286AQ9HBT8 521 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 SLC22A13Q9Y226 551 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 FIS1Q9Y3D6 152 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
SMC4-224ENST00000494612 MED12LQ86YW9 2145 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 ABCA1O95477 2261 aa1.96□□□□□ -2.1
SMC4-224ENST00000494612 NINQ8N4C6 2090 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 PRKDCP78527 4128 aaKnown RBP1.95□□□□□ -2.1
SMC4-224ENST00000494612 TGP01266 2768 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 IGHV3OR15-7A0A075B7D8 119 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 ZNF73O43830 326 aaPredicted RBP1.95□□□□□ -2.1
SMC4-224ENST00000494612 LY6HO94772 140 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 CTXN2P0C2S0 81 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 CBR1P16152 277 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 S100A5P33763 92 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 SSR2P43308 183 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 SULT1A1P50225 295 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 RWDD2BP57060 319 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 NAA20P61599 178 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 LSM6P62312 80 aaKnown RBP1.95□□□□□ -2.1
SMC4-224ENST00000494612 PLCXD2Q0VAA5 305 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 PRDX4Q13162 271 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 NNATQ16517 81 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 C10orf91Q5T1B1 145 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 FAM78BQ5VT40 261 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 NIT1Q86X76 327 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 OR1M1Q8NGA1 313 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 CD200R1Q8TD46 325 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 MUCL1Q96DR8 90 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 DIRAS2Q96HU8 199 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 SLC35G5Q96KT7 338 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 AICDAQ9GZX7 198 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 OR51I2Q9H344 312 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 CBLN4Q9NTU7 201 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 IL20Q9NYY1 176 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 VPS29Q9UBQ0 182 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 RPUSD1Q9UJJ7 312 aaKnown RBP1.95□□□□□ -2.1
SMC4-224ENST00000494612 LINC00588Q9Y4M8 146 aa1.95□□□□□ -2.1
SMC4-224ENST00000494612 EXPH5Q8NEV8 1989 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 TMED7-TICAM2A0A0A6YYA0 188 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 IGKV1-12A0A0C4DH73 117 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 DPRXA6NFQ7 191 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 GSTZ1O43708 216 aaPredicted RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 IGKV1D-12P01611 117 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 HIST1H1TP22492 207 aaPredicted RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 CDK2P24941 298 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 HSD11B1P28845 292 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 CRABP1P29762 137 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 MAP2K4P45985 399 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 IDH3GP51553 393 aaPredicted RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 DSCR4P56555 118 aaPredicted RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 TMEM33P57088 247 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 LINC00313P59037 77 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 SPCS3P61009 180 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 SNRPD2P62316 118 aaKnown RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 OR2F1Q13607 317 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 HIST3H3Q16695 136 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 AKIRIN2Q53H80 203 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 366.7 ms