RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RNF125Q96EQ8 232 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 TUBA4BQ9H853 241 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 PAIP2BQ9ULR5 123 aaKnown RBP6.5□□□□□ -1.37
ITGB1-217ENST00000494395 U3KQK5 164 aa6.5□□□□□ -1.37
ITGB1-217ENST00000494395 A0A1W2PS18 150 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 FAM25EA8MYX2 175 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 K7EQG2 157 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 PAX4O43316 350 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 METTL15P1P0C7V9 234 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 RAB32Q13637 225 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 TMEM182Q6ZP80 229 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-217ENST00000494395 GBGT1Q8N5D6 347 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 FAM24BQ8N5W8 94 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 RCHY1Q96PM5 261 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 GPN1Q9HCN4 374 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-217ENST00000494395 UBQLN2Q9UHD9 624 aa6.49□□□□□ -1.37
ITGB1-217ENST00000494395 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
ITGB1-217ENST00000494395 IGKV3-7A0A075B6H7 116 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 SIX6O95475 246 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 EIF2B2P49770 351 aaKnown RBP6.48□□□□□ -1.37
ITGB1-217ENST00000494395 H2BFSP57053 126 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 ZNF124Q15973 351 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 XP32Q5T750 250 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 OR10P1Q8NGE3 313 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 NARS2Q96I59 477 aaKnown RBP6.48□□□□□ -1.37
ITGB1-217ENST00000494395 NMES1Q9C002 83 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 MAP6D1Q9H9H5 199 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
ITGB1-217ENST00000494395 DNAH7Q8WXX0 4024 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 AGRNO00468 2067 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 IGSF23A1L1A6 192 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 FAM24AA6NFZ4 105 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 H0YIZ8 118 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 GOSR2O14653 212 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 DEDDO75618 318 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 PTTG1O95997 202 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 CFDP00746 253 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-217ENST00000494395 FABP1P07148 127 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 GATA2P23769 480 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-217ENST00000494395 TFPI2P48307 235 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 PLP1P60201 277 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 LYZP61626 148 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 RRAS2P62070 204 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-217ENST00000494395 PAFAH1B2P68402 229 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 AKR1C1Q04828 323 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 OR2F1Q13607 317 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 CYP2G1PQ6ZSU1 146 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 GRAMD2BQ96HH9 432 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 PBDC1Q9BVG4 233 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 GGACTQ9BVM4 153 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 GGTLC1Q9BX51 225 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 NPVFQ9HCQ7 196 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 LYRM2Q9NU23 88 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-217ENST00000494395 SLC45A2Q9UMX9 530 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 STAB2Q8WWQ8 2551 aa6.47□□□□□ -1.37
ITGB1-217ENST00000494395 LOC102724200A0A096LPH7 203 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-217ENST00000494395 HELTA6NFD8 242 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 L7N2F9 121 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 MALP21145 153 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 NUP62P37198 522 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-217ENST00000494395 CMC4P56277 68 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-217ENST00000494395 S100A10P60903 97 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 VAMP2P63027 116 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 SLC38A11Q08AI6 406 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 VWC2Q2TAL6 325 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 C1orf194Q5T5A4 169 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 SIGLEC15Q6ZMC9 328 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 APRG1Q8IVJ8 170 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 TMEM252Q8N6L7 170 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 BPIFCQ8NFQ6 507 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 STXBP6Q8NFX7 210 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 RETNQ9HD89 108 aa6.46□□□□□ -1.38
ITGB1-217ENST00000494395 KIR2DL5BA0A0G2JN68 375 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 KIR2DL5BA0A0G2JPC4 375 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 SMCO3A2RU48 225 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 H3BRN7 92 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 DNASE2O00115 360 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-217ENST00000494395 SOCS3O14543 225 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 CST7O76096 145 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 PVALBP20472 110 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-217ENST00000494395 SULT1A1P50225 295 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 CAV2P51636 162 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 AP2S1P53680 142 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-217ENST00000494395 DEFB131AP59861 70 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 SELENOTP62341 195 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 KIR2DL5AQ8N109 375 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 KIR2DL5BQ8NHK3 375 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 MGST2Q99735 147 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 SEPSECSQ9HD40 501 aaKnown RBP6.45□□□□□ -1.38
ITGB1-217ENST00000494395 NRN1Q9NPD7 142 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 OR5AC2Q9NZP5 309 aa6.45□□□□□ -1.38
ITGB1-217ENST00000494395 MGAT4CQ9UBM8 478 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms