RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GAS1P54826 345 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 RGPD1P0DJD0 1748 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 IGKV1D-43A0A0B4J1Z2 117 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 C4orf51C9J302 202 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 F5H768 121 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 CLPSP04118 112 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 WBP1Q96G27 269 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 PDE4DIPQ5VU43 2346 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 IGHG2P01859 326 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 SLC25A16P16260 332 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 POU2AF1Q16633 256 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 IL17RELQ6ZVW7 336 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 C9orf106Q8NAJ2 232 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 MDS2Q8NDY4 140 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 MSRB2Q9Y3D2 182 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 TINCRA0A1B0GVN0 87 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 NXPH4O95158 308 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 KLHL30-AS1Q8NEE0 82 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV1-3A0A0C4DH29 117 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 SHISA9B4DS77 424 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 CRYBA4P53673 196 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 STPG4Q8N801 248 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 K7EP34 96 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 TMEM219Q86XT9 240 aa6.44□□□□□ -1.38
BRCA1-221ENST00000493795 ZNFX1Q9P2E3 1918 aaKnown RBP6.43□□□□□ -1.38
BRCA1-221ENST00000493795 SEC61GP60059 68 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 LY6G6FQ5SQ64 297 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 TTC3P53804 2025 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 PRSS29PA6NIE9 313 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 GAGE7O76087 117 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 GAGE12FP0CL80 117 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 GAGE12GP0CL81 117 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 GAGE12IP0CL82 117 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 MP68P56378 58 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 Q86TA4 180 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 ZNF329Q86UD4 541 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 PLCH1Q4KWH8 1693 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 Q8N8P6 123 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 KLHDC3Q9BQ90 382 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 TMEM243Q9BU79 118 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 PKIGQ9Y2B9 76 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 SHISA3A0PJX4 238 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 H0YIZ8 118 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 UBE2BP63146 152 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-221ENST00000493795 LYNX1G3V0Z9 82 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 LYNX1P0DP58 116 aa6.43□□□□□ -1.38
BRCA1-221ENST00000493795 TFF1P04155 84 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV1-8P0DP01 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 MCRIP2Q9BUT9 160 aaKnown RBP6.42□□□□□ -1.38
BRCA1-221ENST00000493795 TJP1Q07157 1748 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 A0A1B0GUL6 1792 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV1-46P01743 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 ARMS2P0C7Q2 107 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 C2orf66Q6UXQ4 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 GLRX5Q86SX6 157 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 SCN11AQ9UI33 1791 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV1-18A0A0C4DH31 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 A0A1W2PR77 199 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 CRYGCP07315 174 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 C10orf55Q5SWW7 151 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 ZNF664Q8N3J9 261 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 DAZ1Q9NQZ3 744 aaKnown RBP6.42□□□□□ -1.38
BRCA1-221ENST00000493795 PRO1854Q9UHT4 67 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 NDUFA12Q9UI09 145 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV1-24A0A0C4DH33 117 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 F6UB75 175 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 EFNA4P52798 201 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 VWC2Q2TAL6 325 aa6.42□□□□□ -1.38
BRCA1-221ENST00000493795 TEX48A0A1B0GUV7 120 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 TIAF1O95411 115 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 LYZL4Q96KX0 146 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 NUP98P52948 1817 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 A8MWP6 167 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 B4DSR2 109 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 H3BUX3 64 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 AZU1P20160 251 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 FUSP35637 526 aaKnown RBP eCLIP6.41□□□□□ -1.38
BRCA1-221ENST00000493795 C5orf64Q2M2E5 130 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 IGFL4Q6B9Z1 124 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 TMEM75Q8N9X5 138 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 C15orf53Q8NAA6 179 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 ORMDL1Q9P0S3 153 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 PAPPA2Q9BXP8 1791 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 M0R1W7 72 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 NDUFS6O75380 124 aaKnown RBP6.41□□□□□ -1.38
BRCA1-221ENST00000493795 NDUFB1O75438 58 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 BTCP35070 178 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 CSRP2Q16527 193 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 C8orf31Q8N9H6 132 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 NRAPQ86VF7 1730 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 K7EP13 123 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 DKK1O94907 266 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 CFHR3Q02985 330 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms