RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 QRFPP83859 136 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 ZNF415Q09FC8 603 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 ZNF672Q499Z4 452 aaPredicted RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 C17orf82Q86X59 251 aaPredicted RBP16.51■□□□□ 0.23
RNF40-203ENST00000493683 GUSBP1Q15486 140 aa16.51■□□□□ 0.23
RNF40-203ENST00000493683 EFNA4P52798 201 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 ESPL1Q14674 2120 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 DLX4Q92988 240 aaPredicted RBP16.5■□□□□ 0.23
RNF40-203ENST00000493683 A0A1W2PRX2 142 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 H0YJW9 148 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 TOMM40O96008 361 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 USMG5Q96IX5 58 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 MLNRO43193 412 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 PSPNO60542 156 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 FAM90A2PQ658T7 463 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 RCHY1Q96PM5 261 aa16.5■□□□□ 0.23
RNF40-203ENST00000493683 INTS1Q8N201 2190 aaKnown RBP16.5■□□□□ 0.23
RNF40-203ENST00000493683 SYS1-DBNDD2H3BUS1 97 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 ITGB1BP1O14713 200 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 NDUFS8O00217 210 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 SH2D1AO60880 128 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 TFF1P04155 84 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 CD177Q8N6Q3 437 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 RFNGQ9Y644 331 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 CD24P25063 80 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 VGLL1Q99990 258 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 SPANXA1Q9NS26 97 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 CASP8AP2Q9UKL3 1982 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 PSME4Q14997 1843 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 C3orf79P0CE67 100 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 TDGF1P3P51864 188 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 GLRX5Q86SX6 157 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
RNF40-203ENST00000493683 CFPP27918 469 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 RIPPLY3P57055 190 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 FOXL2NBQ6ZUU3 175 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 CEP250Q9BV73 2442 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 C5orf64Q2M2E5 130 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 FAM223BA6NKX1 122 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 SSBP2P81877 361 aaPredicted RBP16.48■□□□□ 0.23
RNF40-203ENST00000493683 PDE6HQ13956 83 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 Q6P435 159 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 FAM223AQ8IWN6 122 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 CRIM1Q9NZV1 1036 aa16.48■□□□□ 0.23
RNF40-203ENST00000493683 ZNF876PQ49A33 203 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 C10orf55Q5SWW7 151 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 ASCL4Q6XD76 172 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 JPT2Q9H910 190 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
RNF40-203ENST00000493683 TRAV40A0A0B4J280 105 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 VMO1Q7Z5L0 202 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 DOCK4Q8N1I0 1966 aa16.47■□□□□ 0.23
RNF40-203ENST00000493683 NCR2O95944 276 aa16.46■□□□□ 0.23
RNF40-203ENST00000493683 C20orf204Q6ZNR8 217 aa16.46■□□□□ 0.23
RNF40-203ENST00000493683 CRIPAKQ8N1N5 446 aa16.46■□□□□ 0.23
RNF40-203ENST00000493683 CST9LQ9H4G1 147 aa16.46■□□□□ 0.23
RNF40-203ENST00000493683 FAM231BA6NCW3 169 aa16.46■□□□□ 0.22
RNF40-203ENST00000493683 CD5LO43866 347 aa16.46■□□□□ 0.22
RNF40-203ENST00000493683 NTF4P34130 210 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 RPL15P61313 204 aaKnown RBP16.45■□□□□ 0.22
RNF40-203ENST00000493683 HGFACQ04756 655 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 MYMXA0A1B0GTQ4 84 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 CLPSP04118 112 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 UBE2V1Q13404 147 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 ZCCHC24Q8N2G6 241 aaKnown RBP16.45■□□□□ 0.22
RNF40-203ENST00000493683 C15orf62A8K5M9 175 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 SPACA3Q8IXA5 215 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 PLXNA1Q9UIW2 1896 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 A6NNC1 897 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 LYNX1G3V0Z9 82 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 LYNX1P0DP58 116 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 Q0VG73 95 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 TMEM256Q8N2U0 113 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 DNAJC30Q96LL9 226 aa16.45■□□□□ 0.22
RNF40-203ENST00000493683 A0A087WX48 190 aa16.44■□□□□ 0.22
RNF40-203ENST00000493683 LCN12Q6JVE5 192 aa16.44■□□□□ 0.22
RNF40-203ENST00000493683 GAFA1Q96PS6 74 aa16.44■□□□□ 0.22
RNF40-203ENST00000493683 ALPK2Q86TB3 2170 aa16.44■□□□□ 0.22
RNF40-203ENST00000493683 SIGLEC9Q9Y336 463 aa16.44■□□□□ 0.22
RNF40-203ENST00000493683 SRRM4A7MD48 611 aaKnown RBP16.44■□□□□ 0.22
RNF40-203ENST00000493683 BUB1B-PAK6H3BSN5 160 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 PYY3Q5JQD4 70 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 C1QTNF4Q9BXJ3 329 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 ZNF492Q9P255 531 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 CD33P20138 364 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 C2orf82Q6UX34 121 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 ZNF329Q86UD4 541 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 AKAP6Q13023 2319 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 ESDP10768 282 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
RNF40-203ENST00000493683 Q86TA4 180 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 TRAV3A0A0B4J244 114 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 PAX4O43316 350 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 CACNA1EQ15878 2313 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 FOXG1P55316 489 aaPredicted RBP16.42■□□□□ 0.22
RNF40-203ENST00000493683 IGHV3-64A0A075B6Q5 118 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 LINC00473A8K010 186 aa16.42■□□□□ 0.22
RNF40-203ENST00000493683 LEPROTO15243 131 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms