RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LOXL2Q9Y4K0 774 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 TRBV25-1A0A075B6N4 114 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 C5orf63A6NC05 138 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 GGTLC3B5MD39 225 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF542PQ5EBM4 170 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 GTSCR1Q86UQ5 136 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 LRRC75A-AS1Q8N1F1 130 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 ANKRD29Q8N6D5 301 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 MRAPQ8TCY5 172 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 SLC37A2Q8TED4 501 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 WIPF2Q8TF74 440 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-205ENST00000493587 RPEQ96AT9 228 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM167BQ9NRX6 74 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 USF3Q68DE3 2245 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 TRAV8-4A0A0B4J246 113 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 MBD3L4A6NDZ8 208 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-205ENST00000493587 MBD3L3A6NE82 208 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-205ENST00000493587 MBD3L5A6NJ08 208 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-205ENST00000493587 J3QLI3 93 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 AREGP15514 252 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 H2BFWTQ7Z2G1 175 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 C11orf52Q96A22 123 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 TCF19Q9Y242 345 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 A0A1W2PPI3 338 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 ZIC3O60481 467 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 KIR2DS2P43631 304 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 MEOX1P50221 254 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 HSPE1P61604 102 aaKnown RBP5.57□□□□□ -1.52
VPS13B-205ENST00000493587 FOXC1Q12948 553 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 SLC25A53Q5H9E4 307 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 GAGE2AQ6NT46 116 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 WDR83OSQ9Y284 106 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV3D-11A0A0A0MRZ8 115 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 ORM2P19652 201 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 ACP1P24666 158 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 GATA4P43694 442 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF415Q09FC8 603 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 IFI27L1Q96BM0 104 aa5.57□□□□□ -1.52
VPS13B-205ENST00000493587 E9PLN8 166 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 MGST3O14880 152 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 NDUFA7O95182 113 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV1-39P01597 117 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV1D-39P04432 117 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 COL8A2P25067 703 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 ASIPP42127 132 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 CFHR1Q03591 330 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 LGALS9BQ3B8N2 356 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 LGALS9CQ6DKI2 356 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 MIR17HGQ75NE6 70 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 PHLDA1Q8WV24 401 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-205ENST00000493587 CFHR4Q92496 578 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 PRTFDC1Q9NRG1 225 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 DKK2Q9UBU2 259 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FAM90A18PA6NE21 464 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FAM90A16PA6NEW6 464 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 LINC01549A6NIU2 74 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FAM90A8PA6NJQ4 464 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FAM90A9PA6NNJ1 464 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 P01737 135 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 SMCPP49901 116 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FOXG1P55316 489 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-205ENST00000493587 TRIP6Q15654 476 aaKnown RBP5.56□□□□□ -1.52
VPS13B-205ENST00000493587 EFNB3Q15768 340 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 ATP5L2Q7Z4Y8 100 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 KIR2DL5BQ8NHK3 375 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 RASL10AQ92737 203 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 DUX3Q96PT4 197 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 PROCRQ9UNN8 238 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 RAXQ9Y2V3 346 aa5.56□□□□□ -1.52
VPS13B-205ENST00000493587 FAM236AA0A1B0GUQ0 79 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 FAM236BA0A1B0GV22 79 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 LINC01548A6NM66 108 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 DKK1O94907 266 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 MPV17P39210 176 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 HHEXQ03014 270 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF441Q8N8Z8 693 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 FLYWCH2Q96CP2 140 aaKnown RBP5.55□□□□□ -1.52
VPS13B-205ENST00000493587 AAMDCQ9H7C9 122 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 DSCAML1Q8TD84 2053 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 LY6G6EA0A0G2JKS1 128 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 M0R135 149 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 MPDU1O75352 247 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 IGHG1P01857 330 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 PMVKQ15126 192 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF56Q15929 161 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF799Q96GE5 643 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM160Q9NX00 188 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 U3KQA8 63 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM213A2RRL7 107 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 LIPT2A6NK58 231 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 H0YGG7 62 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 CD7P09564 240 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 UBE2L3P68036 154 aaKnown RBP5.55□□□□□ -1.52
VPS13B-205ENST00000493587 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 C3orf36Q3SXR2 165 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms