RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 OR8I2Q8N0Y5 310 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 INO80EQ8NBZ0 244 aaPredicted RBP6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 STXBP6Q8NFX7 210 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 OR5C1Q8NGR4 320 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 SCGB1C1Q8TD33 95 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 RNF2Q99496 336 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 KCNIP2Q9NS61 270 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 OR5AC2Q9NZP5 309 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 HIGD1AQ9Y241 93 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 MEGF8Q7Z7M0 2845 aa6.14□□□□□ -1.43
TM4SF1-204ENST00000493348 IGSF23A1L1A6 192 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 OR11H12B2RN74 326 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 AGPAT2O15120 278 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 MPDU1O75352 247 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 LINC00869P0C866 280 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 FGF7P21781 194 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 RPL12P30050 165 aaKnown RBP6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 GALR1P47211 349 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 CLINT1Q14677 625 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 USF2Q15853 346 aaPredicted RBP6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 SIGLEC15Q6ZMC9 328 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 ADAMTSL5Q6ZMM2 481 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 GBGT1Q8N5D6 347 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 STPG3Q8N7X2 389 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 OR1L4Q8NGR5 311 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 ARL6Q9H0F7 186 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 VSIRQ9H7M9 311 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 SLC25A22Q9H936 323 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 DOK5Q9P104 306 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
TM4SF1-204ENST00000493348 IGKV1D-37A0A075B6S9 117 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ELOA3CA0A087WX78 387 aaPredicted RBP6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 FXYD6-FXYD2A0A087WZ82 144 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ZNF785A8K8V0 405 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 APOHP02749 345 aaPredicted RBP6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ATF4P18848 351 aaPredicted RBP6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 CXCL3P19876 107 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 GATA2P23769 480 aaPredicted RBP6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ID1P41134 155 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 NHLH2Q02577 135 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ARL16Q0P5N6 197 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 C1orf194Q5T5A4 169 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 SAMD13Q5VXD3 122 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 C16orf54Q6UWD8 224 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 OR11H7Q8NGC8 314 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 OR2T35Q8NGX2 323 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 LRRC20Q8TCA0 184 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 GPR82Q96P67 336 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 PFDN5Q99471 154 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ATP5SQ99766 215 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 MS4A6AQ9H2W1 248 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 ZMAT4Q9H898 229 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 SRD5A3Q9H8P0 318 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 UBQLN2Q9UHD9 624 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 HSPB11Q9Y547 144 aa6.12□□□□□ -1.43
TM4SF1-204ENST00000493348 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 TRAV2A0A0B4J234 112 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 CD7P09564 240 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 IGHV4-30-4P0DP06 118 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 MEOX2P50222 304 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 B2MP61769 119 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 DEFB125Q8N687 156 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 SMIM3Q9BZL3 60 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 C11orf1Q9H5F2 150 aa6.11□□□□□ -1.43
TM4SF1-204ENST00000493348 ZNF98A6NK75 572 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 H0YIZ8 118 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 BUB3O43684 328 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 RPL7P18124 248 aaKnown RBP6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 ZNF266Q14584 549 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 VWC2Q2TAL6 325 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 LINC00305Q7Z4B0 112 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 MGST2Q99735 147 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 B9D2Q9BPU9 175 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 RNF126Q9BV68 326 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 SLC25A39Q9BZJ4 359 aaPredicted RBP6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 ARV1Q9H2C2 271 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 DNAJC4Q9NNZ3 241 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 NRN1Q9NPD7 142 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 WDR83OSQ9Y284 106 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 LSM4Q9Y4Z0 139 aaKnown RBP6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 U3KQE9 123 aa6.1□□□□□ -1.43
TM4SF1-204ENST00000493348 LOC102724200A0A096LPH7 203 aaPredicted RBP6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 BORCS7-ASMTA0A0B4J1R7 106 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 FRMD6-AS1P0C7T7 363 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 NHLRC4P0CG21 123 aaPredicted RBP6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 LYL1P12980 280 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 RPL29P47914 159 aaKnown RBP6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 APOC4P55056 127 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 PLP1P60201 277 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 OPCMLQ14982 345 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
TM4SF1-204ENST00000493348 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms