RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
PDLIM1-204ENST00000492511 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
PDLIM1-204ENST00000492511 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
PDLIM1-204ENST00000492511 NPVFQ9HCQ7 196 aa5.28□□□□□ -1.56
PDLIM1-204ENST00000492511 IGSF23A1L1A6 192 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 SMCO3A2RU48 225 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 ZNF98A6NK75 572 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 KNCNA6PVL3 124 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 H0YIZ8 118 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 UBE2CO00762 179 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 SOCS3O14543 225 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 GOSR2O14653 212 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 PRAF2O60831 178 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 CST7O76096 145 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 CFDP00746 253 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 FABP1P07148 127 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 ZNF688P0C7X2 276 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 ORM2P19652 201 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 AP2S1P53680 142 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 APOC4P55056 127 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 H2BFSP57053 126 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 PLP1P60201 277 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 SLC38A11Q08AI6 406 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 C1orf194Q5T5A4 169 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 Q6ZWC4 215 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 BPIFCQ8NFQ6 507 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 RNF183Q96D59 192 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 GGACTQ9BVM4 153 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 CSTL1Q9H114 145 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 GPN1Q9HCN4 374 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 NRN1Q9NPD7 142 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 LYRM2Q9NU23 88 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 SLC45A2Q9UMX9 530 aa5.27□□□□□ -1.57
PDLIM1-204ENST00000492511 L7N2F9 121 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 AGPAT2O15120 278 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 SPRY2O43597 315 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 LINC00869P0C866 280 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 LYL1P12980 280 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 BCAP31P51572 246 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 CAV2P51636 162 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 DEFA1P59665 94 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 DEFA3P59666 94 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 DEFB1P60022 68 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 S100A10P60903 97 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 VAMP2P63027 116 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 EWSR1Q01844 656 aaKnown RBP eCLIP5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 VWC2Q2TAL6 325 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 DEFB135Q30KP9 77 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 PSMG4Q5JS54 123 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 CASC10Q5T4H9 136 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 TEPPQ6URK8 271 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 TMEM252Q8N6L7 170 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 OR1B1Q8NGR6 318 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 MGST2Q99735 147 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 RNF126Q9BV68 326 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 SCRT1Q9BWW7 348 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 NMES1Q9C002 83 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 SLC25A32Q9H2D1 315 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 SEPSECSQ9HD40 501 aaKnown RBP5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 OR5AC2Q9NZP5 309 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 DOK5Q9P104 306 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 TP53TG1Q9Y2A0 90 aa5.26□□□□□ -1.57
PDLIM1-204ENST00000492511 H3BRN7 92 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 HYPMO75409 117 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 NUP62P37198 522 aaPredicted RBP5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 SULT1A1P50225 295 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 SELENOTP62341 195 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 NHLH2Q02577 135 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 ACTL10Q5JWF8 245 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 GDF5OSQ5U4N7 250 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 STHQ8IWL8 128 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 OR8I2Q8N0Y5 310 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 TMEM217Q8N7C4 229 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 TMEM37Q8WXS4 190 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 UHRF2Q96PU4 802 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 SLC25A22Q9H936 323 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 MGAT4CQ9UBM8 478 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 FBXL17Q9UF56 701 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 PFDN2Q9UHV9 154 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 WDR83OSQ9Y284 106 aa5.25□□□□□ -1.57
PDLIM1-204ENST00000492511 TRAV8-2A0A0B4J237 113 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 A0A0J9YWU9 116 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 H3BMM0 161 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 MRPS12O15235 138 aaKnown RBP5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 CA1P00915 261 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PVALBP20472 110 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 C4BPBP20851 252 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 S100A11P31949 105 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 SNRPD3P62318 126 aaKnown RBP5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PRR20EP86478 221 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PRR20CP86479 221 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PRR20DP86480 221 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PRR20BP86481 221 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 PRR20AP86496 221 aa5.24□□□□□ -1.57
PDLIM1-204ENST00000492511 LRRC37A5PQ49AS3 106 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms