RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 TAF15Q92804 592 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRA2B-215ENST00000492417 TXNDC17Q9BRA2 123 aa3.64□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM222Q9H0R3 208 aa3.64□□□□□ -1.83
TRA2B-215ENST00000492417 SH3BGRL3Q9H299 93 aa3.64□□□□□ -1.83
TRA2B-215ENST00000492417 CDC42EP3Q9UKI2 254 aa3.64□□□□□ -1.83
TRA2B-215ENST00000492417 KALRNO60229 2985 aa3.64□□□□□ -1.83
TRA2B-215ENST00000492417 A8MWL6 223 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 IGKV1-16P04430 117 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SRP19P09132 144 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 LMO1P25800 156 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 CNTFRP26992 372 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 DUTP33316 252 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 VDAC2P45880 294 aaPredicted RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 UBE2E1P51965 193 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 RIPPLY3P57055 190 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 DNM1P46Q6ZS02 220 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 PPP1R27Q86WC6 154 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 BEND2Q8NDZ0 799 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 OR4X1Q8NH49 305 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 QTRT1Q9BXR0 403 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 AP5S1Q9NUS5 200 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SORL1Q92673 2214 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 IGSF23A1L1A6 192 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 FAM181BA6NEQ2 426 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 LINC00473A8K010 186 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 H0Y980 276 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM250H0YL14 139 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 CBLN1P23435 193 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 ZNF134P52741 427 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 OR52M1Q8NGK5 317 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SMIM8Q96KF7 97 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 HIST1H2BLQ99880 126 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 RPRMQ9NS64 109 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 KAAG1Q9UBP8 84 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TCF19Q9Y242 345 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 A0A087WWC5 75 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 NPIPB11E5RHQ5 1161 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 EREGO14944 169 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SNCGO76070 127 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SMIM17P0DL12 118 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 GATA3P23771 443 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 EMP1P54849 157 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 LCNL1Q6ZST4 164 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 PDPNQ86YL7 162 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SELENOHQ8IZQ5 122 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 OR4X2Q8NGF9 303 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 RBKSQ9H477 322 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 PRDM13Q9H4Q3 707 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 FLNAP21333 2647 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TRAV14DV4A0A0A6YYC5 116 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 CENPVL3A0A0U1RRI6 287 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 ZNF785A8K8V0 405 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 LY6G6DO95868 133 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 HERVK_113P61574 105 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 HSPE1P61604 102 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SMAGPQ0VAQ4 97 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM30BQ3MIR4 351 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 C4orf48Q5BLP8 95 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 IBA57Q5T440 356 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM136Q6ZRR5 245 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SLC25A48Q6ZT89 311 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 HIST3H2BBQ8N257 126 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 OR4F17Q8NGA8 305 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 DYNLRB2Q8TF09 96 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SRSF12Q8WXF0 261 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 ZNF48Q96MX3 618 aaPredicted RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 SIGMAR1Q99720 223 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM208Q9BTX3 173 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 RABAC1Q9UI14 185 aa3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TBL2Q9Y4P3 447 aaKnown RBP3.63□□□□□ -1.83
TRA2B-215ENST00000492417 TRAV3A0A0B4J244 114 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 RND2P52198 227 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 GFI1BQ5VTD9 330 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 OR10W1Q8NGF6 305 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 OSR1Q8TAX0 266 aaPredicted RBP3.62□□□□□ -1.83
TRA2B-215ENST00000492417 MYOZ3Q8TDC0 251 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 ST6GALNAC6Q969X2 333 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 NABP2Q9BQ15 211 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 RTBDNQ9BSG5 229 aaPredicted RBP3.62□□□□□ -1.83
TRA2B-215ENST00000492417 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 IFI27L2Q9H2X8 130 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 F11RQ9Y624 299 aaKnown RBP3.62□□□□□ -1.83
TRA2B-215ENST00000492417 SPCS1Q9Y6A9 102 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 IGHV3-66A0A0C4DH42 116 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 LOC389332A0A1B0GUA5 103 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 TCRBV4S1A1TA0A5B7 111 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 WIPF3A6NGB9 483 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 FGF16O43320 207 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 LINC00869P0C866 280 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 SMIM13P0DJ93 91 aa3.62□□□□□ -1.83
TRA2B-215ENST00000492417 BTCP35070 178 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms