RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TPTE2P1Q5T6R2 138 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 GDF5OSQ5U4N7 250 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ZNF600Q6ZNG1 722 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 TMEM116Q8NCL8 245 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 BEND2Q8NDZ0 799 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 RAB1BQ9H0U4 201 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 LPAR2Q9HBW0 351 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 OSTCQ9NRP0 149 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ARL2-SNX15V9GYD0 113 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 SH2D7A6NKC9 451 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-220ENST00000492280 NCBP2LA6PVI3 153 aaKnown RBP9.86□□□□□ -0.83
HMGN1-220ENST00000492280 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 IGKV1-17P01599 117 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 SAMD10Q9BYL1 202 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 Q9H3A6 140 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 POLR3KQ9Y2Y1 108 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-220ENST00000492280 BMPR1BO00238 502 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 TOMM20LQ6UXN7 152 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 TRGV9Q99603 122 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 CBLN4Q9NTU7 201 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 EPDR1Q9UM22 224 aa9.86□□□□□ -0.83
HMGN1-220ENST00000492280 I3L2K1 104 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 K7EIM0 57 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
HMGN1-220ENST00000492280 SSTP61278 116 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 CFHR4Q92496 578 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 NEU1Q99519 415 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 RASL11BQ9BPW5 248 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 UBTD1Q9HAC8 227 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 ZNF586Q9NXT0 402 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 LOC105371242A0A075B767 164 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 A0A1B0GV90 55 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 MYCNOSP40205 109 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 CIARTQ8N365 385 aaPredicted RBP9.85□□□□□ -0.83
HMGN1-220ENST00000492280 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 TMEM68Q96MH6 324 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 TBX15Q96SF7 602 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 RNF2Q99496 336 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 DPM3Q9P2X0 92 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 HIGD1AQ9Y241 93 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 LRRK2Q5S007 2527 aa9.85□□□□□ -0.83
HMGN1-220ENST00000492280 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 NBR2O15453 112 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 ETFRF1Q6IPR1 90 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 VMO1Q7Z5L0 202 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 RBM14Q96PK6 669 aaKnown RBP9.84□□□□□ -0.83
HMGN1-220ENST00000492280 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-220ENST00000492280 CUBNO60494 3623 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 M0QZ24 198 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 C11orf71Q6IPW1 123 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 GOLT1AQ6ZVE7 132 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 VN1R17PQ8TDU5 208 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 TIMD4Q96H15 378 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 NAGKQ9UJ70 344 aa9.84□□□□□ -0.83
HMGN1-220ENST00000492280 M0R3E3 92 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 ZNF253O75346 499 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 IL4P05112 153 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 NTF3P20783 257 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 LY6G5BQ8NDX9 201 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 C7orf69Q9H7B7 122 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 FBXL7Q9UJT9 491 aa9.84□□□□□ -0.84
HMGN1-220ENST00000492280 A8MWP6 167 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 C19orf84I3L1E1 186 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 EREGO14944 169 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 AMY1AP04745 511 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 KRTDAPP60985 99 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
HMGN1-220ENST00000492280 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 C8orf46Q8TAG6 207 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 IGHV3OR16-10A0A075B7F0 116 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 AMTP48728 403 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 TAS2R60P59551 318 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 GNB1LQ9BYB4 327 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 CHODLQ9H9P2 273 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 PAM16Q9Y3D7 125 aa9.83□□□□□ -0.84
HMGN1-220ENST00000492280 TCRAP04437 139 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 USF2Q15853 346 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-220ENST00000492280 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-220ENST00000492280 TBL2Q9Y4P3 447 aaKnown RBP9.82□□□□□ -0.84
HMGN1-220ENST00000492280 IZUMO1RA6ND01 250 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 FOXA3P55318 350 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-220ENST00000492280 TPPP2P59282 170 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 FAM120AOSQ5T036 256 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 IGFL4Q6B9Z1 124 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 MBD6Q96DN6 1003 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
HMGN1-220ENST00000492280 APCSP02743 223 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
HMGN1-220ENST00000492280 REC114Q7Z4M0 266 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 ATG101Q9BSB4 218 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 DOPEY2Q9Y3R5 2298 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms