RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	SEC22C	Q9BRL7	303 aa		11.11	□□□□□ -0.63
MRPL55-231	ENST00000492170	SYNGR2	O43760	224 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	TOMM40	O96008	361 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	IFNA10	P01566	189 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	IL5	P05113	134 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	NUTF2	P61970	127 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	USF2	Q15853	346 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	NPIPB3	Q92617	1050 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	ACY3	Q96HD9	319 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	CIB3	Q96Q77	187 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	C1QTNF4	Q9BXJ3	329 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	SEPSECS	Q9HD40	501 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	NRN1	Q9NPD7	142 aa		11.1	□□□□□ -0.63
MRPL55-231	ENST00000492170	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	RD3L	P0DJH9	198 aa		11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	NUP62	P37198	522 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	DEFA1	P59665	94 aa		11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	DEFA3	P59666	94 aa		11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	SIGLEC15	Q6ZMC9	328 aa		11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	CSNK1G2-AS1	Q8NCQ2	148 aa		11.09	□□□□□ -0.63
MRPL55-231	ENST00000492170	IGHV4-4	A0A075B6R2	117 aa		11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	IAPP	P10997	89 aa		11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	IAH1	Q2TAA2	248 aa	Predicted RBP	11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	MARVELD1	Q9BSK0	173 aa		11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	RNF126	Q9BV68	326 aa		11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	MAGT1	Q9H0U3	335 aa		11.08	□□□□□ -0.64
MRPL55-231	ENST00000492170	BUB3	O43684	328 aa		11.07	□□□□□ -0.64
MRPL55-231	ENST00000492170	PSG1	P11464	419 aa		11.07	□□□□□ -0.64
MRPL55-231	ENST00000492170	NKX2-1	P43699	371 aa	Predicted RBP	11.07	□□□□□ -0.64
MRPL55-231	ENST00000492170	PFDN2	Q9UHV9	154 aa		11.07	□□□□□ -0.64
MRPL55-231	ENST00000492170	CELA1	Q9UNI1	258 aa		11.07	□□□□□ -0.64
MRPL55-231	ENST00000492170	PRSS46	E5RG02	174 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170		H3BMM0	161 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	WRB	O00258	174 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	CCS	O14618	274 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	PRAF2	O60831	178 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	GPX4	P36969	197 aa	Predicted RBP	11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	POLR2G	P62487	172 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	OR51G1	Q8NGK1	321 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	RNF125	Q96EQ8	232 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	PBDC1	Q9BVG4	233 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	XCL2	Q9UBD3	114 aa		11.06	□□□□□ -0.64
MRPL55-231	ENST00000492170	DEFB131B	A0A096LNP1	70 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	SNRPGP15	A8MWD9	76 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	INMT-MINDY4	F8WBC2	141 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	AMBP	P02760	352 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	HLA-DRB4	P13762	266 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	RAB11A	P62491	216 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	RPP30	P78346	268 aa	Known RBP	11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	OR8G2P	Q6IF36	304 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	SLC35E1	Q96K37	410 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	GPN1	Q9HCN4	374 aa	Predicted RBP	11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	RCL1	Q9Y2P8	373 aa	Known RBP	11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	HLA-DRB4	X5D2U9	266 aa		11.05	□□□□□ -0.64
MRPL55-231	ENST00000492170	ZFP92	A6NM28	416 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	PAX9	P55771	341 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	TAS2R30	P59541	319 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	IL15RA	Q13261	267 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	C12orf74	Q32Q52	190 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	ZNF767P	Q75MW2	155 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	SMIM8	Q96KF7	97 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	C2orf50	Q96LR7	162 aa		11.04	□□□□□ -0.64
MRPL55-231	ENST00000492170	PMS2P5	A8MQ11	134 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170		H3BP45	60 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	SSSCA1	O60232	199 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	MBP	P02686	304 aa	Predicted RBP	11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	FABP1	P07148	127 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	ID1	P41134	155 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	GAMT	Q14353	236 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	SPANXN5	Q5MJ07	72 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	PSENEN	Q9NZ42	101 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	GSKIP	Q9P0R6	139 aa		11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	STRAP	Q9Y3F4	350 aa	Known RBP	11.03	□□□□□ -0.64
MRPL55-231	ENST00000492170	TSC22D2	O75157	780 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	SCGB1D2	O95969	90 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	PTTG1	O95997	202 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170		P0DMU3	169 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	FAM231A	P0DMU4	169 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	FAM231C	P0DMU5	169 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	LYZ	P61626	148 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	TMEM14EP	Q6UXP3	125 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	GSG1L	Q6UXU4	331 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	LINC00336	Q6ZUF6	198 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	LINC00052	Q96N35	136 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	NEU1	Q99519	415 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	NDUFAF3	Q9BU61	184 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	C11orf1	Q9H5F2	150 aa		11.02	□□□□□ -0.65
MRPL55-231	ENST00000492170	IGKV1D-37	A0A075B6S9	117 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	TMEM189	A5PLL7	270 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	C5orf51	A6NDU8	294 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	SMIM9	A6NGZ8	99 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	FAM25E	A8MYX2	175 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170		K7EPK0	472 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	IGKV3-20	P01619	116 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	PSMB3	P49720	205 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	ZNF90	Q03938	601 aa		11.01	□□□□□ -0.65
MRPL55-231	ENST00000492170	C1orf194	Q5T5A4	169 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms