RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 THBS3P49746 956 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 RAB31Q13636 194 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 SLC25A48Q6ZT89 311 aaKnown RBP7.44□□□□□ -1.22
BRCA1-219ENST00000491747 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 BAGE2Q86Y30 109 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 C8orf31Q8N9H6 132 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 OR10X1Q8NGY0 326 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 C11orf52Q96A22 123 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 RPEQ96AT9 228 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 HSPB9Q9BQS6 159 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 VAMP8Q9BV40 100 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 SAMD10Q9BYL1 202 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 GNG12Q9UBI6 72 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-219ENST00000491747 PRSS46E5RG02 174 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 TIMM23O14925 209 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-219ENST00000491747 PROK1P58294 105 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 Q0VG73 95 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 RPEL1Q2QD12 228 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 TEPPQ6URK8 271 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 PPP1R14DQ9NXH3 145 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 JPT1Q9UK76 154 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 TP53TG3Q9ULZ0 132 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 LSM4Q9Y4Z0 139 aaKnown RBP7.44□□□□□ -1.22
BRCA1-219ENST00000491747 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
BRCA1-219ENST00000491747 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
BRCA1-219ENST00000491747 OOSP1A8MZH6 123 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 MT-ND6P03923 174 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 BLCAPP62952 87 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 OR1L6Q8NGR2 347 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 ZNF702PQ9H963 129 aa7.43□□□□□ -1.22
BRCA1-219ENST00000491747 IGHV1-3A0A0C4DH29 117 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 K7EN84 100 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 M0R1X1 148 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 HAX1O00165 279 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 SLC17A3O00476 420 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 DLEU1O43261 78 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-219ENST00000491747 BRS3P32247 399 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 KIR2DS2P43631 304 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 LINC00310P59036 64 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 GAGE1Q13065 139 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 TMEM30BQ3MIR4 351 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 COX19Q49B96 90 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 MMD2Q8IY49 270 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 VN1R17PQ8TDU5 208 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 EAF1Q96JC9 268 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-219ENST00000491747 S1PR3Q99500 378 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 GNB1LQ9BYB4 327 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 SEPSECSQ9HD40 501 aaKnown RBP7.42□□□□□ -1.22
BRCA1-219ENST00000491747 PAM16Q9Y3D7 125 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 ARL2-SNX15V9GYD0 113 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 IGHV3-72A0A0B4J1Y9 119 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 AMY1AP04745 511 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 AREGP15514 252 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 CD33P20138 364 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 RAB7AP51149 207 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 ZNF137PP52743 207 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 HIST2H2BDQ6DRA6 164 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 CCDC144NLQ6NUI1 221 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 WDR73Q6P4I2 378 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 STPG3Q8N7X2 389 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 TMEM208Q9BTX3 173 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 RAB9BQ9NP90 201 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 ZNF586Q9NXT0 402 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 GOLT1BQ9Y3E0 138 aa7.42□□□□□ -1.22
BRCA1-219ENST00000491747 SH2D7A6NKC9 451 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-219ENST00000491747 PROP1O75360 226 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 BTF3P20290 206 aaKnown RBP7.41□□□□□ -1.22
BRCA1-219ENST00000491747 NPY1RP25929 384 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 MOB3BQ86TA1 216 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 VKORC1L1Q8N0U8 176 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 LYG1Q8N1E2 194 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 SLC24A4Q8NFF2 622 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 OR4B1Q8NGF8 309 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 RBM14Q96PK6 669 aaKnown RBP7.41□□□□□ -1.22
BRCA1-219ENST00000491747 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 NPFFR1Q9GZQ6 430 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 SERTAD4Q9NUC0 356 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 GNG4P50150 75 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-219ENST00000491747 OR10J3Q5JRS4 329 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 Q8N2B8 174 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 OR4C13Q8NGP0 309 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 OR4S2Q8NH73 311 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 IFI27L2Q9H2X8 130 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 ENY2Q9NPA8 101 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 TMEM167BQ9NRX6 74 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 V9GYV3 84 aa7.41□□□□□ -1.22
BRCA1-219ENST00000491747 HELTA6NFD8 242 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 OR10J4P0C629 311 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 OR8I2Q8N0Y5 310 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms