RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 C5orf30Q96GV9 206 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 GP6Q9HCN6 339 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 U3KQA8 63 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 H7C2G1 150 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 GFRALQ6UXV0 394 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 PRR7Q8TB68 274 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 TMEM131Q92545 1883 aa10.46□□□□□ -0.74
SHOX2-205ENST00000490689 AHRRA9YTQ3 701 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 KLK10O43240 276 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 MGPP08493 103 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 ZNF329Q86UD4 541 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 ATP5L2Q7Z4Y8 100 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 C11orf52Q96A22 123 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
SHOX2-205ENST00000490689 D6R8Y8 96 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 TCRAP04437 139 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 OR4A5Q8NH83 315 aa10.45□□□□□ -0.74
SHOX2-205ENST00000490689 RPUSD1Q9UJJ7 312 aaKnown RBP10.45□□□□□ -0.74
SHOX2-205ENST00000490689 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
SHOX2-205ENST00000490689 DYSFO75923 2080 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 IGHV3-66A0A0C4DH42 116 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 EVI2AP22794 236 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 PRSS57Q6UWY2 283 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 TANC2Q9HCD6 1990 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 NAV3Q8IVL0 2385 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 SMKR1H3BMG3 65 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 C16orf97H3BN30 126 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 M0R3E3 92 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 TGFAP01135 160 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 IGHV1-24A0A0C4DH33 117 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 A0A1B0GWB2 263 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 CD5LO43866 347 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 PSMB2P49721 201 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 KIR3DS1Q14943 382 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 DEFB123Q8N688 67 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 SEC11AP67812 179 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 TP53TG3Q9ULZ0 132 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 PSG8Q9UQ74 426 aa10.44□□□□□ -0.74
SHOX2-205ENST00000490689 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
SHOX2-205ENST00000490689 LGALS7P47929 136 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 SPOCK3Q9BQ16 436 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 KMT2EQ8IZD2 1858 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 MMP23AO75900 390 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 LOXL3P58215 753 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 NEUROG1Q92886 237 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 PRR20EP86478 221 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 PRR20CP86479 221 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 PRR20DP86480 221 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 PRR20BP86481 221 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 PRR20AP86496 221 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 RASL11AQ6T310 242 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 OR5AN1Q8NGI8 311 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
SHOX2-205ENST00000490689 NUP210LQ5VU65 1888 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 SRRM4A7MD48 611 aaKnown RBP10.42□□□□□ -0.74
SHOX2-205ENST00000490689 NPIPB5A8MRT5 1133 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-205ENST00000490689 BVES-AS1Q5T3Y7 98 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 MTURNQ8N3F0 131 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 FAM169BQ8N8A8 192 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 C15orf65H3BRN8 121 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 HBDP02042 147 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 BMI1P35226 326 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 LEPP41159 167 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 SSBP2P81877 361 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-205ENST00000490689 BCL6BQ8N143 479 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-205ENST00000490689 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
SHOX2-205ENST00000490689 NDUFA3O95167 84 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 CFHR2P36980 270 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 TIMM23BQ5SRD1 257 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 AMN1Q8IY45 258 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 LINC00312Q9Y6C7 94 aa10.42□□□□□ -0.74
SHOX2-205ENST00000490689 FAM90A27PA6NNH2 459 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 DLX1P56177 255 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 KLF17Q5JT82 389 aaPredicted RBP10.41□□□□□ -0.74
SHOX2-205ENST00000490689 SLC25A2Q9BXI2 301 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 RBPJQ06330 500 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
SHOX2-205ENST00000490689 RALYQ9UKM9 306 aaKnown RBP10.41□□□□□ -0.74
SHOX2-205ENST00000490689 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 SAP30O75446 220 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 C1orf185Q5T7R7 199 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
SHOX2-205ENST00000490689 DSCAML1Q8TD84 2053 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms