RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 LHFPL4Q7Z7J7 247 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NHLRC2Q8NBF2 726 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ARPC1AQ92747 370 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SLC25A39Q9BZJ4 359 aaPredicted RBP7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 Q9H3A6 140 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 RPH3ALQ9UNE2 315 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 RNF24Q9Y225 148 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TBL2Q9Y4P3 447 aaKnown RBP7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 KLF12Q9Y4X4 402 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ROS1P08922 2347 aa7.57□□□□□ -1.2
RAB3GAP1-205ENST00000489858 PTPRZ1P23471 2315 aaPredicted RBP7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MALRD1Q5VYJ5 2156 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 POLEQ07864 2286 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TRAV30A0A087WSZ9 112 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 A0A1W2PRD5 423 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 A0A1W2PRF3 423 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 A0A1W2PRM7 423 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 H3BRN7 92 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 GZMBP10144 247 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ESDP10768 282 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TMEM11P17152 192 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 CDKN1AP38936 164 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 EFNA4P52798 201 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 PAFAH1B2P68402 229 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 Q0VG73 95 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 LY6DQ14210 128 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IQCJQ1A5X6 159 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 PRR27Q6MZM9 219 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 Q8N6K4 173 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 LINC00479Q96M42 142 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ZNF48Q96MX3 618 aaPredicted RBP7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 GPR82Q96P67 336 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SHANK2-AS3Q9BTD1 123 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SIRPDQ9H106 197 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ZNF331Q9NQX6 463 aaPredicted RBP7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NAT8BQ9UHF3 227 aa7.56□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SPTBN2O15020 2390 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IGLV11-55A0A075B6I3 123 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IGHV2-70DA0A0C4DH43 119 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 GRIFINA4D1Z8 144 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IGKV1-17P01599 117 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TCRAP04437 139 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MFAP4P55083 255 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 RAB4BP61018 213 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 C9orf152Q5JTZ5 239 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 UNQ6494/PRO21346Q6UXR6 183 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 Q86TA4 180 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TMEM256Q8N2U0 113 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 OR4F17Q8NGA8 305 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 WIPF2Q8TF74 440 aaPredicted RBP7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IGFBPL1Q8WX77 278 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 RNF125Q96EQ8 232 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MS4A10Q96PG2 267 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 MRPL27Q9P0M9 148 aaKnown RBP7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NBEAQ8NFP9 2946 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ASPMQ8IZT6 3477 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ATMQ13315 3056 aa7.55□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TRBV6-1A0A0K0K1D8 114 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 A0A1B0GUS0 222 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 GNG7O60262 68 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SPINK4O60575 86 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SERF1AO75920 110 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 LTAP01374 205 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 DEFA6Q01524 100 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 EBI3Q14213 229 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 CT83Q5H943 113 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 OR10J3Q5JRS4 329 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 LEMD1Q68G75 181 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TSKUQ8WUA8 353 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 ITLN2Q8WWU7 325 aaPredicted RBP7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 FAM103A1Q9BTL3 118 aaKnown RBP7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 RPP21Q9H633 154 aaKnown RBP7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 C1RLQ9NZP8 487 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 THYN1Q9P016 225 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 U3KQE9 123 aa7.54□□□□□ -1.2
RAB3GAP1-205ENST00000489858 IGF2RP11717 2491 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 A0A1W2PPR1 153 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 WI2-2373I1.2A0A1W2PRP0 233 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 NCBP2LA6PVI3 153 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 H3BTX0 84 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 K7EQM0 130 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 TOX4O94842 621 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 CA1P00915 261 aaPredicted RBP7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 APCSP02743 223 aa7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 SNRPCP09234 159 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-205ENST00000489858 FAM106CPP0CH98 169 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms