RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ACTL10Q5JWF8 245 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 FAM219AQ8IW50 185 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 SLC35G3Q8N808 338 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 STXBP6Q8NFX7 210 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 OR4D10Q8NGI6 311 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 OR52I2Q8NH67 350 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 ZFAND1Q8TCF1 268 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 GLYATL2Q8WU03 294 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 TMEM170AQ8WVE7 144 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 TMEM230Q96A57 120 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 ABHD1Q96SE0 405 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 RTBDNQ9BSG5 229 aaPredicted RBP4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 FUNDC2Q9BWH2 189 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 CLEC5AQ9NY25 188 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 TBC1D24Q9ULP9 559 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
PRPF40A-210ENST00000489741 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 IGLV5-52A0A0A0MRZ9 124 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 FAM90A26D6RGX4 464 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 RTL8CO15255 209 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 BUB3O43684 328 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 AMBPP02760 352 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 SLC25A4P12235 298 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 OPRK1P41145 380 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 RORCP51449 518 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 AKR1C2P52895 323 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 AP2S1P53680 142 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 DHODHQ02127 395 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 DHRS2Q13268 280 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 USF2Q15853 346 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 CTF1Q16619 201 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 RNASE10Q5GAN6 216 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 ZNF705AQ6ZN79 300 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 SELENOHQ8IZQ5 122 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 POM121L12Q8N7R1 296 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 TMEM229BQ8NBD8 167 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 OR1S2Q8NGQ3 325 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 OR13C8Q8NGS7 320 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 LHFPL5Q8TAF8 219 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 RNASEH2CQ8TDP1 164 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 Q8WTZ3 238 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 GPR146Q96CH1 333 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 RRNAD1Q96FB5 475 aaKnown RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 SCRT1Q9BWW7 348 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 TMEM222Q9H0R3 208 aa4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.53□□□□□ -1.68
PRPF40A-210ENST00000489741 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 HELTA6NFD8 242 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 ZNF705FA8MVS1 300 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 TNFAIP8O95379 198 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 IGKV3-20P01619 116 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 ZNF705DP0CH99 300 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 ZNF705BP0CI00 300 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 OR10J1P30954 320 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 HOXA1P49639 335 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 RND2P52198 227 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 TRIM16LQ309B1 348 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 NMSQ5H8A3 153 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 STEAP1BQ6NZ63 245 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 CCDC71LQ8N9Z2 235 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 MARCH1Q8TCQ1 289 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 NARS2Q96I59 477 aaKnown RBP4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 ENY2Q9NPA8 101 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 NRN1Q9NPD7 142 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 COPZ2Q9P299 210 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 GPR132Q9UNW8 380 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 TMEM56-RWDD3S4R434 201 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
PRPF40A-210ENST00000489741 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 CRYM-AS1A6NIL9 109 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 SOCS3O14543 225 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 SCGB2A1O75556 95 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 GABARAPO95166 117 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 RAB3DO95716 219 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 OR5AC1P0C628 307 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 RD3LP0DJH9 198 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 P0DMU3 169 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 ZNF182P17025 639 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 EIF2B2P49770 351 aaKnown RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 TAS2R19P59542 299 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 NUTF2P61970 127 aaKnown RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 SNRPD3P62318 126 aaKnown RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 SSBP1Q04837 148 aaKnown RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 SURF2Q15527 256 aaPredicted RBP4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 Q6ZR54 194 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 C15orf40Q8WUR7 153 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 FAM210BQ96KR6 192 aa4.51□□□□□ -1.69
PRPF40A-210ENST00000489741 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms