RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 UBE2L5PA0A1B0GUS4 154 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 TRBV12-3P01733 135 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 IGHV3-23P01764 117 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 GP9P14770 177 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 FGF7P21781 194 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 ADMP35318 185 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 RND2P52198 227 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 RPEL1Q2QD12 228 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 THAP8Q8NA92 274 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 OR9G4Q8NGQ1 327 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 OR4X1Q8NH49 305 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 NPIPB3Q92617 1050 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 ACTR3CQ9C0K3 210 aaPredicted RBP8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
SCAMP4-208ENST00000489554 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 IGKV1-17P01599 117 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 IGLC1P0CG04 106 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 SYNJ2BPP57105 145 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 SFT2D1Q8WV19 159 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 ACY3Q96HD9 319 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 MGST2Q99735 147 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 CHRDL1Q9BU40 450 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 SLC35B3Q9H1N7 401 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 C21orf62Q9NYP8 219 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 THYN1Q9P016 225 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 PEMTQ9UBM1 199 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 RFNGQ9Y644 331 aa8.03□□□□□ -1.12
SCAMP4-208ENST00000489554 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 RBFOX3A6NFN3 312 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 CLN5O75503 358 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 CTSGP08311 255 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 MFAP4P55083 255 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 KHDC3LQ587J8 217 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 ETFRF1Q6IPR1 90 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 SUN5Q8TC36 379 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 SLC35E1Q96K37 410 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 ATP6V0BQ99437 205 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 TXN2Q99757 166 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 SIGLEC8Q9NYZ4 499 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 PLA2G2EQ9NZK7 142 aa8.02□□□□□ -1.13
SCAMP4-208ENST00000489554 TRBV7-1A0A0A6YYK4 115 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 CTXND1A0A1B0GTU2 59 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 A0A1W2PPV4 95 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 BMPR1BO00238 502 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 AGPAT2O15120 278 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 GPR183P32249 361 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 ZNF90Q03938 601 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 CLEC19AQ6UXS0 136 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 EEF1AKMT3Q96AZ1 226 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 TXNDC17Q9BRA2 123 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 RSG1Q9BU20 258 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 GGTLC1Q9BX51 225 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 NKX6-2Q9C056 277 aaPredicted RBP8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 RPRMQ9NS64 109 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 SLC45A2Q9UMX9 530 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 U3KQK5 164 aa8.01□□□□□ -1.13
SCAMP4-208ENST00000489554 SMCO3A2RU48 225 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 OR2T8A6NH00 312 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PPP5D1E7EU14 171 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 TGOLN2O43493 480 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 GGCTO75223 188 aaKnown RBP8□□□□□ -1.13
SCAMP4-208ENST00000489554 CLEC3BP05452 202 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 CSN3P07498 182 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 LINC00869P0C866 280 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 OR10J1P30954 320 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PRR20EP86478 221 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PRR20CP86479 221 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PRR20DP86480 221 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PRR20BP86481 221 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 PRR20AP86496 221 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 AKR1C1Q04828 323 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 TIGITQ495A1 244 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 ZNF506Q5JVG8 444 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 FFAR4Q5NUL3 377 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 LCN12Q6JVE5 192 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 OR2K2Q8NGT1 345 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 TRGV9Q99603 122 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 MANBALQ9NQG1 85 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 SORL1Q92673 2214 aa8□□□□□ -1.13
SCAMP4-208ENST00000489554 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 GATA2P23769 480 aaPredicted RBP7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 NPBWR1P48145 328 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 PSMB3P49720 205 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 FHITP49789 147 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 Q56UQ5 140 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 SOHLH1Q5JUK2 328 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 SPSB3Q6PJ21 355 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 RNF2Q99496 336 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 ASCL2Q99929 193 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms