RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 NIPSNAP3BQ9BS92 247 aa14.03□□□□□ -0.16
CD40-206ENST00000489304 CHRDL1Q9BU40 450 aa14.03□□□□□ -0.16
CD40-206ENST00000489304 SLC25A39Q9BZJ4 359 aaPredicted RBP14.03□□□□□ -0.16
CD40-206ENST00000489304 PUS1Q9Y606 427 aaKnown RBP eCLIP14.03□□□□□ -0.16
CD40-206ENST00000489304 CYSRT1A8MQ03 144 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 NUPL2O15504 423 aaKnown RBP14.02□□□□□ -0.16
CD40-206ENST00000489304 IGLV1-40P01703 118 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 TRGV3P03979 118 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 IL4P05112 153 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 BTN1A1Q13410 526 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.16
CD40-206ENST00000489304 A0A1W2PRE2 83 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 CLEC3BP05452 202 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 PYYP10082 97 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 HNF1AP20823 631 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 NPPCP23582 126 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 GPR183P32249 361 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 KIAA0141Q14154 515 aaPredicted RBP14.01□□□□□ -0.17
CD40-206ENST00000489304 AWAT1Q58HT5 328 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 FXYD5Q96DB9 178 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 OTOGQ6ZRI0 2925 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 H3BRN7 92 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 CD99P14209 185 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 S100A7AQ86SG5 101 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 TMEM86BQ8N661 226 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 TVP23CQ96ET8 276 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 ZNF414Q96IQ9 312 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 PRSS22Q9GZN4 317 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 ESM1Q9NQ30 184 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 TMEM160Q9NX00 188 aa14.01□□□□□ -0.17
CD40-206ENST00000489304 ZNF727A8MUV8 499 aa14□□□□□ -0.17
CD40-206ENST00000489304 M0R036 132 aa14□□□□□ -0.17
CD40-206ENST00000489304 DNASE2O00115 360 aaPredicted RBP14□□□□□ -0.17
CD40-206ENST00000489304 GP9P14770 177 aa14□□□□□ -0.17
CD40-206ENST00000489304 USF2Q15853 346 aaPredicted RBP14□□□□□ -0.17
CD40-206ENST00000489304 CLEC19AQ6UXS0 136 aa14□□□□□ -0.17
CD40-206ENST00000489304 ZNF600Q6ZNG1 722 aa14□□□□□ -0.17
CD40-206ENST00000489304 RPUSD4Q96CM3 377 aaKnown RBP14□□□□□ -0.17
CD40-206ENST00000489304 USMG5Q96IX5 58 aa14□□□□□ -0.17
CD40-206ENST00000489304 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
CD40-206ENST00000489304 PARLQ9H300 379 aa14□□□□□ -0.17
CD40-206ENST00000489304 ZNF702PQ9H963 129 aa14□□□□□ -0.17
CD40-206ENST00000489304 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
CD40-206ENST00000489304 C7orf77A4D0Y5 90 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 TGOLN2O43493 480 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 TPPP2P59282 170 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 RHEBQ15382 184 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 C11orf52Q96A22 123 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 NPFFR1Q9GZQ6 430 aa13.99□□□□□ -0.17
CD40-206ENST00000489304 SONP18583 2426 aaKnown RBP13.99□□□□□ -0.17
CD40-206ENST00000489304 DNAJC9-AS1A6NH13 148 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 PNRC1Q12796 327 aaPredicted RBP13.98□□□□□ -0.17
CD40-206ENST00000489304 LEMD1Q68G75 181 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 C20orf24Q9BUV8 137 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 SDF2L1Q9HCN8 221 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 TMEM89A2RUT3 159 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 NAT8Q9UHE5 227 aa13.98□□□□□ -0.17
CD40-206ENST00000489304 SCO2A0A1W2PP80 73 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 GGTLC3B5MD39 225 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 NDUFB4O95168 129 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 IGHG4P01861 327 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 PF4V1P10720 104 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 ZNF674Q2M3X9 581 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 LCNL1Q6ZST4 164 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
CD40-206ENST00000489304 NBEAP1P0C6P0 100 aa13.96□□□□□ -0.17
CD40-206ENST00000489304 SRD5A1P18405 259 aa13.96□□□□□ -0.17
CD40-206ENST00000489304 TOMM20LQ6UXN7 152 aa13.96□□□□□ -0.17
CD40-206ENST00000489304 ZFAND3Q9H8U3 227 aa13.96□□□□□ -0.17
CD40-206ENST00000489304 RPS10P5Q9NQ39 176 aa13.96□□□□□ -0.17
CD40-206ENST00000489304 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 ZNF98A6NK75 572 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 INAFM1C9JVW0 142 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 RAB9AP51151 201 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 SUMO1P63165 101 aaKnown RBP13.95□□□□□ -0.18
CD40-206ENST00000489304 RELQ04864 619 aaPredicted RBP13.95□□□□□ -0.18
CD40-206ENST00000489304 ZNF329Q86UD4 541 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 BPIFA4PQ86YQ2 179 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 Q8N2B8 174 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 RABAC1Q9UI14 185 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.95□□□□□ -0.18
CD40-206ENST00000489304 B4DEV8 164 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 BMPR1BO00238 502 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 HIST1H1EP10412 219 aaKnown RBP13.95□□□□□ -0.18
CD40-206ENST00000489304 PSMB8P28062 276 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 MYCNOSP40205 109 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 DERL1Q9BUN8 251 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 GNB4Q9HAV0 340 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 RNF24Q9Y225 148 aa13.95□□□□□ -0.18
CD40-206ENST00000489304 MRPS12O15235 138 aaKnown RBP13.94□□□□□ -0.18
CD40-206ENST00000489304 S100A7P31151 101 aa13.94□□□□□ -0.18
CD40-206ENST00000489304 TMEM88Q6PEY1 159 aa13.94□□□□□ -0.18
CD40-206ENST00000489304 CBLN2Q8IUK8 224 aa13.94□□□□□ -0.18
CD40-206ENST00000489304 ELOVL1Q9BW60 279 aa13.94□□□□□ -0.18
CD40-206ENST00000489304 A0A087WWC5 75 aa13.93□□□□□ -0.18
CD40-206ENST00000489304 IGHV3-35A0A0C4DH35 117 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms