RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TRAV26-1A0A087WT03 109 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 CNN1P51911 297 aaKnown RBP11.16□□□□□ -0.62
USP48-210ENST00000489108 LINC00315P59091 139 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 LYZP61626 148 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
USP48-210ENST00000489108 LHFPL1Q86WI0 220 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 SNX29P2Q8IUI4 249 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 PPP1R14BQ96C90 147 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 COPZ2Q9P299 210 aa11.16□□□□□ -0.62
USP48-210ENST00000489108 IGKV1D-37A0A075B6S9 117 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 A0A0J9YY99 117 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 ZFP92A6NM28 416 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 RPS19P39019 145 aaKnown RBP11.15□□□□□ -0.62
USP48-210ENST00000489108 KRTAP10-1P60331 282 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 GPR141Q7Z602 305 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 NOXA1Q86UR1 476 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 RXFP4Q8TDU9 374 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 LINC01587Q99440 93 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
USP48-210ENST00000489108 J3QL48 77 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
USP48-210ENST00000489108 CDS2O95674 445 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 HTN1P15515 57 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 OR2F1Q13607 317 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 LHFPL5Q8TAF8 219 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
USP48-210ENST00000489108 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
USP48-210ENST00000489108 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
USP48-210ENST00000489108 SMIM31A0A1B0GVY4 71 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 SNRPGP15A8MWD9 76 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 EREGO14944 169 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 MEOX2P50222 304 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 GAMTQ14353 236 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 MEF2DQ14814 521 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 SAMD13Q5VXD3 122 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
USP48-210ENST00000489108 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 ZNF503Q96F45 646 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
USP48-210ENST00000489108 TMEM222Q9H0R3 208 aa11.13□□□□□ -0.63
USP48-210ENST00000489108 NOP10Q9NPE3 64 aaKnown RBP11.13□□□□□ -0.63
USP48-210ENST00000489108 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
USP48-210ENST00000489108 OR5AC1P0C628 307 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 M6PRP20645 277 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 TAS2R60P59551 318 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 OR13C8Q8NGS7 320 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 ZFAND1Q8TCF1 268 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 SLC25A32Q9H2D1 315 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 VCX3BQ9H321 246 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 RAB26Q9ULW5 256 aa11.12□□□□□ -0.63
USP48-210ENST00000489108 B3GALNT1O75752 331 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 IFNA5P01569 189 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 HOXA5P20719 270 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 GALR1P47211 349 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
USP48-210ENST00000489108 RNASE10Q5GAN6 216 aaKnown RBP11.11□□□□□ -0.63
USP48-210ENST00000489108 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
USP48-210ENST00000489108 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 SLC25A22Q9H936 323 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
USP48-210ENST00000489108 TEX13DA0A0J9YY54 714 aaPredicted RBP11.1□□□□□ -0.63
USP48-210ENST00000489108 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 BOLA2-SMG1P6H3BVE0 249 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 CD3DP04234 171 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 ICAM4Q14773 271 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 TERB2Q8NHR7 220 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 MARCH1Q8TCQ1 289 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 U3KQ87 197 aa11.1□□□□□ -0.63
USP48-210ENST00000489108 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 APOA1P02647 267 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 FABP1P07148 127 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 ZNF182P17025 639 aaPredicted RBP11.09□□□□□ -0.63
USP48-210ENST00000489108 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
USP48-210ENST00000489108 NEDD8Q15843 81 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 LGI3Q8N145 548 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 OR4D10Q8NGI6 311 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
USP48-210ENST00000489108 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 GABARAPO95166 117 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
USP48-210ENST00000489108 RHOBP62745 196 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 HAMPP81172 84 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 SCGB2B2Q4G0G5 96 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 457.4 ms