RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 KLK5Q9Y337 293 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 CYCSP99999 105 aaKnown RBP10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 EWSR1Q01844 656 aaKnown RBP eCLIP10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 C2orf50Q96LR7 162 aa10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 MFFQ9GZY8 342 aa10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 MGAT4CQ9UBM8 478 aa10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 FBXL17Q9UF56 701 aa10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 AGRNO00468 2067 aa10.11□□□□□ -0.79
SPTLC1-207ENST00000488921 IGKV1D-37A0A075B6S9 117 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 WRBO00258 174 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 CCSO14618 274 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 CFDP00746 253 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 LYZP61626 148 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 ZNF90Q03938 601 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 TRGV9Q99603 122 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
SPTLC1-207ENST00000488921 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 ACTL10Q5JWF8 245 aa10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 C1orf194Q5T5A4 169 aa10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 PPP1R14BQ96C90 147 aa10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 STRAPQ9Y3F4 350 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-207ENST00000488921 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 S100A7P31151 101 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 NKX2-1P43699 371 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 FCN2Q15485 313 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 C1QTNF4Q9BXJ3 329 aa10.08□□□□□ -0.8
SPTLC1-207ENST00000488921 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 SIX6O95475 246 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 RLN2P04090 185 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 MIFP14174 115 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 C4BPBP20851 252 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 ID1P41134 155 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 RAB40CQ96S21 281 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 NMES1Q9C002 83 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 SLC45A2Q9UMX9 530 aa10.07□□□□□ -0.8
SPTLC1-207ENST00000488921 IGKV1OR2-108A0A075B7D4 117 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 H3BP45 60 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 PSMB3P49720 205 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 ID3Q02535 119 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 OR2F1Q13607 317 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 BPIFCQ8NFQ6 507 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
SPTLC1-207ENST00000488921 ZNF705EA8MWA4 302 aaPredicted RBP10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 L7N2F9 121 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 SSSCA1O60232 199 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 GIG44P09565 113 aaPredicted RBP10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 HLA-DRB4P13762 266 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 CXCL3P19876 107 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 MEOX2P50222 304 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 H2BFSP57053 126 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 S100A10P60903 97 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 POLR2GP62487 172 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 VAMP2P63027 116 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 ACOT7LQ6ZUV0 252 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 OR8I2Q8N0Y5 310 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 Q8NAQ8 132 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 PSENENQ9NZ42 101 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 LSM5Q9Y4Y9 91 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 HLA-DRB4X5D2U9 266 aa10.05□□□□□ -0.8
SPTLC1-207ENST00000488921 H3BMM0 161 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 LY6G6CO95867 125 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 MBPP02686 304 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 GIPP09681 153 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 PET100P0DJ07 73 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 GALR1P47211 349 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 FGL1Q08830 312 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 SMIM8Q96KF7 97 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 GPR82Q96P67 336 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
SPTLC1-207ENST00000488921 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 SMCO3A2RU48 225 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 ISLRO14498 428 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 DEFB4AO15263 64 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 RAP2BP61225 183 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 SPATA31B1PQ5VZV4 182 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 FOXI2Q6ZQN5 318 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 TMEM147Q9BVK8 224 aa10.03□□□□□ -0.8
SPTLC1-207ENST00000488921 C11orf94C9JXX5 98 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms