RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 LYPD1Q8N2G4 141 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 NRG4Q8WWG1 115 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 RBPMSQ93062 196 aaKnown RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 GPR146Q96CH1 333 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 GNPNAT1Q96EK6 184 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 C16orf74Q96GX8 76 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 SLC35E1Q96K37 410 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 PPP1R14DQ9NXH3 145 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-211ENST00000488809 U3KQ87 197 aa4.54□□□□□ -1.68
PTCH1-211ENST00000488809 APOA1P02647 267 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 PI3P19957 117 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 M6PRP20645 277 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 DLK1P80370 383 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 OR5I1Q13606 314 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 SPINK13Q1W4C9 94 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 SP6Q3SY56 376 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 RNASE12Q5GAN4 147 aaKnown RBP4.53□□□□□ -1.68
PTCH1-211ENST00000488809 NMSQ5H8A3 153 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 TMEM144Q7Z5S9 345 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 LHFPL1Q86WI0 220 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 SNX29P2Q8IUI4 249 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 OR11H7Q8NGC8 314 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 OR1B1Q8NGR6 318 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 GPR82Q96P67 336 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 LINC01587Q99440 93 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 TMEM222Q9H0R3 208 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 Q9H521 79 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
PTCH1-211ENST00000488809 C14orf166Q9Y224 244 aaKnown RBP4.53□□□□□ -1.68
PTCH1-211ENST00000488809 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 TRAV26-1A0A087WT03 109 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 A0A0G2JRQ6 117 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
PTCH1-211ENST00000488809 H3BNG1 76 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 BOLA2-SMG1P6H3BVE0 249 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 J3QL48 77 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 M0R2Z0 102 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 NXPH3O95157 252 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 CDS2O95674 445 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 OR5AC1P0C628 307 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 SULT1A3P0DMM9 295 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 SULT1A4P0DMN0 295 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 GPX4P36969 197 aaPredicted RBP4.52□□□□□ -1.69
PTCH1-211ENST00000488809 CNN1P51911 297 aaKnown RBP4.52□□□□□ -1.69
PTCH1-211ENST00000488809 TAS2R60P59551 318 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 RHOBP62745 196 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 GAMTQ14353 236 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 SCGB2B2Q4G0G5 96 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 GGNBP1Q5YKI7 109 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 AMTNQ6UX39 209 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 NFE4Q86UQ8 179 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 LGI3Q8N145 548 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 TERB2Q8NHR7 220 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM263Q8WUH6 116 aaKnown RBP4.52□□□□□ -1.69
PTCH1-211ENST00000488809 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 ZNF586Q9NXT0 402 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 SLC45A2Q9UMX9 530 aa4.52□□□□□ -1.69
PTCH1-211ENST00000488809 MRPS16Q9Y3D3 137 aaKnown RBP4.52□□□□□ -1.69
PTCH1-211ENST00000488809 PIGBOS1A0A0B4J2F0 54 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 CRXO43186 299 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-211ENST00000488809 RLN2P04090 185 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 HTN1P15515 57 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 RPS19P39019 145 aaKnown RBP4.51□□□□□ -1.69
PTCH1-211ENST00000488809 LINC00315P59091 139 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 TAS2R19P59542 299 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 RAB11AP62491 216 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 ZNF90Q03938 601 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 ICAM4Q14773 271 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 FCN2Q15485 313 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 NEDD8Q15843 81 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 GPR107Q5VW38 600 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM268Q5VZI3 342 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 S100A7AQ86SG5 101 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 CCDC28AQ8IWP9 274 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 BAP18Q8IXM2 172 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 ZNF738Q8NE65 137 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 OR13C8Q8NGS7 320 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 DTD1Q8TEA8 209 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 C15orf40Q8WUR7 153 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 C20orf173Q96LM9 149 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 UHRF2Q96PU4 802 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 TRGV9Q99603 122 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 C20orf144Q9BQM9 153 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 RSG1Q9BU20 258 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 NAA60Q9H7X0 242 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 NOP10Q9NPE3 64 aaKnown RBP4.51□□□□□ -1.69
PTCH1-211ENST00000488809 COMMD3Q9UBI1 195 aa4.51□□□□□ -1.69
PTCH1-211ENST00000488809 TRAV12-2A0A075B6T6 113 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 PLAC8L1A1L4L8 177 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 ZNF98A6NK75 572 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 SNURFLB1AK76 121 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 FAM25AB3EWG3 89 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 FAM25CB3EWG5 89 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms