RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CNPY1Q3B7I2 92 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 LGALS9CQ6DKI2 356 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 PPP1R14BQ96C90 147 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 CLUHP3Q96NS8 147 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 WDR12Q9GZL7 423 aaKnown RBP16.73■□□□□ 0.27
CUL4A-209ENST00000488558 CLEC5AQ9NY25 188 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 FLVCR2Q9UPI3 526 aa16.73■□□□□ 0.27
CUL4A-209ENST00000488558 H3BP45 60 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 IL7P13232 177 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 FOXI2Q6ZQN5 318 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 ACOT7LQ6ZUV0 252 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 OR8I2Q8N0Y5 310 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 OR4D5Q8NGN0 318 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 C2CD4CQ8TF44 421 aa16.72■□□□□ 0.27
CUL4A-209ENST00000488558 ISLRO14498 428 aa16.71■□□□□ 0.27
CUL4A-209ENST00000488558 MEOX2P50222 304 aa16.71■□□□□ 0.27
CUL4A-209ENST00000488558 AKR1C1Q04828 323 aa16.71■□□□□ 0.27
CUL4A-209ENST00000488558 SPATA31B1PQ5VZV4 182 aa16.71■□□□□ 0.27
CUL4A-209ENST00000488558 BPIFCQ8NFQ6 507 aa16.71■□□□□ 0.27
CUL4A-209ENST00000488558 SAV1Q9H4B6 383 aaPredicted RBP16.71■□□□□ 0.27
CUL4A-209ENST00000488558 S100A7P31151 101 aa16.7■□□□□ 0.26
CUL4A-209ENST00000488558 POLR2GP62487 172 aaKnown RBP eCLIP16.7■□□□□ 0.26
CUL4A-209ENST00000488558 C4orf46Q504U0 113 aa16.7■□□□□ 0.26
CUL4A-209ENST00000488558 TMEM144Q7Z5S9 345 aa16.7■□□□□ 0.26
CUL4A-209ENST00000488558 NDUFA13Q9P0J0 144 aa16.7■□□□□ 0.26
CUL4A-209ENST00000488558 GALR1P47211 349 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 GDF5OSQ5U4N7 250 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 SMIM8Q96KF7 97 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 LINC00052Q96N35 136 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 PSENENQ9NZ42 101 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 XCL2Q9UBD3 114 aa16.69■□□□□ 0.26
CUL4A-209ENST00000488558 ELOA3CA0A087WX78 387 aaPredicted RBP16.68■□□□□ 0.26
CUL4A-209ENST00000488558 LINC00854A0A1B0GVQ3 168 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 ANXA7P20073 488 aaKnown RBP16.68■□□□□ 0.26
CUL4A-209ENST00000488558 PAX9P55771 341 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 MITD1Q8WV92 249 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 GPR82Q96P67 336 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 NEU1Q99519 415 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 SLC25A32Q9H2D1 315 aa16.68■□□□□ 0.26
CUL4A-209ENST00000488558 ZNF98A6NK75 572 aa16.67■□□□□ 0.26
CUL4A-209ENST00000488558 PMS2P5A8MQ11 134 aa16.67■□□□□ 0.26
CUL4A-209ENST00000488558 SSSCA1O60232 199 aa16.67■□□□□ 0.26
CUL4A-209ENST00000488558 HLA-DMBP28068 263 aa16.67■□□□□ 0.26
CUL4A-209ENST00000488558 ZNF705AQ6ZN79 300 aaPredicted RBP16.67■□□□□ 0.26
CUL4A-209ENST00000488558 TMEM147Q9BVK8 224 aa16.67■□□□□ 0.26
CUL4A-209ENST00000488558 FNDC10F2Z333 226 aa16.66■□□□□ 0.26
CUL4A-209ENST00000488558 TMEM14EPQ6UXP3 125 aa16.66■□□□□ 0.26
CUL4A-209ENST00000488558 TMEM182Q6ZP80 229 aaPredicted RBP16.66■□□□□ 0.26
CUL4A-209ENST00000488558 OR1B1Q8NGR6 318 aa16.66■□□□□ 0.26
CUL4A-209ENST00000488558 TRAV10A0A0B4J240 114 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 ZNF705FA8MVS1 300 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-209ENST00000488558 ZNF705DP0CH99 300 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-209ENST00000488558 ZNF705BP0CI00 300 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-209ENST00000488558 ORM2P19652 201 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 GATA2P23769 480 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-209ENST00000488558 TAS2R30P59541 319 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 DLK1P80370 383 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 IAH1Q2TAA2 248 aaPredicted RBP16.65■□□□□ 0.26
CUL4A-209ENST00000488558 CYP2G1PQ6ZSU1 146 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 Q6ZTC4 211 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 SLC25A22Q9H936 323 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 RPRMQ9NS64 109 aa16.65■□□□□ 0.26
CUL4A-209ENST00000488558 KMT2AQ03164 3969 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 SMIM9A6NGZ8 99 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 TSC22D2O75157 780 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 DEFB1P60022 68 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 PLP1P60201 277 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 SELENOTP62341 195 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 EBLN2Q6P2I7 272 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 ZNF709Q8N972 641 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 ZBTB8BQ8NAP8 495 aaPredicted RBP16.64■□□□□ 0.25
CUL4A-209ENST00000488558 C16orf92Q96LL3 132 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 C20orf85Q9H1P6 137 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 APLNQ9ULZ1 77 aa16.64■□□□□ 0.25
CUL4A-209ENST00000488558 A0A0J9YX75 114 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 SMCO3A2RU48 225 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 H3BRN7 92 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 PLA2G10O15496 165 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 LYRM1O43325 122 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 IL5P05113 134 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 C17orf77Q96MU5 243 aa16.63■□□□□ 0.25
CUL4A-209ENST00000488558 VPS13DQ5THJ4 4388 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 A8MTW9 85 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 IGLL5B9A064 214 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 K7EPK0 472 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 IGKV3-20P01619 116 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 RPP25LQ8N5L8 163 aaKnown RBP16.62■□□□□ 0.25
CUL4A-209ENST00000488558 OR4B1Q8NGF8 309 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 RSG1Q9BU20 258 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 CELA1Q9UNI1 258 aa16.62■□□□□ 0.25
CUL4A-209ENST00000488558 RCL1Q9Y2P8 373 aaKnown RBP16.62■□□□□ 0.25
CUL4A-209ENST00000488558 TMEM189A5PLL7 270 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 SCGB1D2O95969 90 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 METTL15P1P0C7V9 234 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 LINC00869P0C866 280 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 RAP2BP61225 183 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 PSG9Q00887 426 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 FAM78BQ5VT40 261 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms