RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 TCRBV4S1A1TA0A5B7 111 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 M0R378 163 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 TAX1BP3O14907 124 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 KLF7O75840 302 aaPredicted RBP0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 DHFRP00374 187 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 S100A6P06703 90 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 REEP5Q00765 189 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 SPA17Q15506 151 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 LYRM7Q5U5X0 104 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 GOLT1AQ6ZVE7 132 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 OR10X1Q8NGY0 326 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 TEX47Q8TBZ9 253 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 BORCS5Q969J3 196 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 BTF3L4Q96K17 158 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 AMELYQ99218 206 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 C9orf16Q9BUW7 83 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 OPTCQ9UBM4 332 aa0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 COL1A1P02452 1464 aaPredicted RBP0.47□□□□□ -2.33
R3HDM1-219ENST00000488035 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 TRBV6-4A0A1B0GX49 114 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 HMGB3O15347 200 aaKnown RBP0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 NDUFB3O43676 98 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 CST8O60676 142 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 E2F6O75461 281 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 SERPINA1P01009 418 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 C1QBP02746 253 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 CAPZBP47756 277 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 TAF1AQ15573 450 aaPredicted RBP0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 C22orf39Q6P5X5 142 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 EXOC3-AS1Q8N2X6 119 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 OR10K1Q8NGX5 313 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 TMEM254Q8TBM7 123 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 CHD3Q12873 2000 aaKnown RBP0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 ZFC3H1O60293 1989 aaKnown RBP0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 ALPK3Q96L96 1907 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 FMN1Q68DA7 1419 aa0.46□□□□□ -2.34
R3HDM1-219ENST00000488035 MYO18AQ92614 2054 aaKnown RBP0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 TMEM210A6NLX4 147 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 TMEM256-PLSCR3K7ERE1 68 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 CD2P06729 351 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 HSD11B1P28845 292 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 EFNA4P52798 201 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 FAM74A1Q5RGS3 127 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 SBSPONQ8IVN8 264 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 ST6GALNAC3Q8NDV1 305 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 GPER1Q99527 375 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 SLC25A21Q9BQT8 299 aaPredicted RBP0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 ARMC1Q9NVT9 282 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 MED29Q9NX70 200 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 PCTPQ9UKL6 214 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 ARL2BPQ9Y2Y0 163 aa0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 MYO5AQ9Y4I1 1855 aaKnown RBP0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
R3HDM1-219ENST00000488035 TRGV10A0A0A0MS01 117 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 IGHV1-58A0A0C4DH39 117 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 NCR3O14931 201 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 IGLV1-51P01701 117 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 HSPE1P61604 102 aaKnown RBP0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 PSG9Q00887 426 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 AKIRIN2Q53H80 203 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 C1orf134Q5TEV5 83 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 Q8TAT8 98 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 C4orf3Q8WVX3 66 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 LINC00052Q96N35 136 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 IMUPQ9GZP8 106 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
R3HDM1-219ENST00000488035 ARHGEF11O15085 1522 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 CITO14578 2027 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 TET1Q8NFU7 2136 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 TRAV10A0A0B4J240 114 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 TLCD2A6NGC4 264 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 A8MWV9 139 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 HOXA6P31267 233 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 BCL2L15Q5TBC7 163 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 KRTAP26-1Q6PEX3 210 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 PATE2Q6UY27 113 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 LINC00322Q6ZN03 302 aaPredicted RBP0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 ZNF833PQ6ZTB9 187 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 PHB2Q99623 299 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 TMEM70Q9BUB7 260 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 PSTPIP2Q9H939 334 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 MIA2Q96PC5 1412 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 ADGRL3Q9HAR2 1447 aa0.43□□□□□ -2.34
R3HDM1-219ENST00000488035 E7EUB6 86 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 NUPR1O60356 82 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 IFNA7P01567 189 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 CRHP06850 196 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 INSL3P51460 131 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 DYNLT3P51808 116 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 NCALDP61601 193 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 UBE2BP63146 152 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 GNG5P63218 68 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 OR5D14Q8NGL3 314 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 YPEL2Q96QA6 119 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 TP53RKQ96S44 253 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 LINC00467Q9BRT7 94 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 GGACTQ9BVM4 153 aa0.42□□□□□ -2.34
R3HDM1-219ENST00000488035 NPCDR1Q9BY65 106 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms