RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 OR10P1Q8NGE3 313 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 OR52E4Q8NGH9 312 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 OR4D11Q8NGI4 311 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 OR2T4Q8NH00 348 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 C1orf54Q8WWF1 131 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 RAB8BQ92930 207 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 MRAP2Q96G30 205 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 SLC35G5Q96KT7 338 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 PGLYRP3Q96LB9 341 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 DNAJC30Q96LL9 226 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 KCTD7Q96MP8 289 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 CCDC115Q96NT0 180 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 PHB2Q99623 299 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 SIGMAR1Q99720 223 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 NAA38Q9BRA0 125 aaKnown RBP0.72□□□□□ -2.29
SMC4-220ENST00000488017 TXNDC17Q9BRA2 123 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 GINS3Q9BRX5 216 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 DCUN1D5Q9BTE7 237 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 CCDC32Q9BV29 185 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 EBPLQ9BY08 206 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 LINC00470Q9BZP3 86 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 AICDAQ9GZX7 198 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 LPAR5Q9H1C0 372 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 OR51I1Q9H343 314 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 SAR1AQ9NR31 198 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 BAIAP2Q9UQB8 552 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 CCL26Q9Y258 94 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 HS3ST2Q9Y278 367 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 TP53TG1Q9Y2A0 90 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 KIAA1549LQ6ZVL6 1849 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 TRPM2O94759 1503 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 ARHGAP5Q13017 1502 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.72□□□□□ -2.29
SMC4-220ENST00000488017 DLC1Q96QB1 1528 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 TULP4Q9NRJ4 1543 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 DOCK11Q5JSL3 2073 aa0.72□□□□□ -2.29
SMC4-220ENST00000488017 TNS1Q9HBL0 1735 aaKnown RBP0.72□□□□□ -2.29
SMC4-220ENST00000488017 TENM3Q9P273 2699 aa0.71□□□□□ -2.29
SMC4-220ENST00000488017 NRXN3Q9Y4C0 1643 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 MPDZO75970 2070 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 ADGRB1O14514 1584 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 DSCAMO60469 2012 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 MUC22E2RYF6 1773 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 BCORQ6W2J9 1755 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 SLIT2O94813 1529 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TRAV8-2A0A0B4J237 113 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TMEM269A0A1B0GVZ9 245 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 A0A1B0GX51 115 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 DHRS12A0PJE2 317 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 C20orf202A1L168 122 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TMEM189A5PLL7 270 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 OR4C46A6NHA9 309 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 FABP5P3A8MUU1 101 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 C1orf196B1AJZ1 125 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TMEM250H0YL14 139 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 CCDC179H3BU77 68 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 FAAHO00519 579 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 PDCD5O14737 125 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 SYNGR1O43759 233 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 OR2T1O43869 369 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 PDE6DO43924 150 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 YPEL1O60688 119 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 RAB36O95755 333 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 IFNA7P01567 189 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TYMSP04818 313 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 REG1AP05451 166 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 SERPINA7P05543 415 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 CSN2P05814 226 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 CTSDP07339 412 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 OR4A8P0C604 315 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 UBBP0CG47 229 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 PET100P0DJ07 73 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 ZNF728P0DKX0 622 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 CPMP14384 443 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 PVALBP20472 110 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 FGF7P21781 194 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 NFYBP25208 207 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 BLVRBP30043 206 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 RPL12P30050 165 aaKnown RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 GRPRP30550 384 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 GABRA2P47869 451 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 ZNF140P52738 457 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 STC1P52823 247 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TMBIM6P55061 237 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 MP68P56378 58 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 NDUFA6P56556 154 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 YPEL3P61236 119 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 GNG11P61952 73 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TNFAIP6P98066 277 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 FABP5Q01469 135 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 HIST1H1AQ02539 215 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 SMAGPQ0VAQ4 97 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 TMEM267Q0VDI3 215 aaPredicted RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 HTR4Q13639 388 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 DIAPH2-AS1Q14236 149 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 EBPQ15125 230 aaKnown RBP0.71□□□□□ -2.3
SMC4-220ENST00000488017 OR8B8Q15620 311 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 MAPK14Q16539 360 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 LTC4SQ16873 150 aa0.71□□□□□ -2.3
SMC4-220ENST00000488017 FAM229BQ4G0N7 80 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms