RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TRAV36DV7A0A075B6V5 113 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRAV5A0A0B4J249 113 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 IGHV1-18A0A0C4DH31 117 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 IGKV1-9A0A0C4DH69 117 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 EFCAB10A6NFE3 127 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 HMSDA8MTL9 139 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 NDUFB3O43676 98 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 COX6A1P12074 109 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPS3P23396 243 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 CMPK1P30085 196 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 RNASE4P34096 147 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 AKR1C3P42330 323 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 INSL3P51460 131 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 DYNLT3P51808 116 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 CKS1BP61024 79 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 PSPHP78330 225 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 RHOGP84095 191 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 PSG9Q00887 426 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 EIF3IQ13347 325 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 SMIM21Q3B7S5 101 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF791Q3KP31 576 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 EIF5AL1Q6IS14 154 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 AAED1Q7RTV5 226 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR8I2Q8N0Y5 310 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 WFDC11Q8NEX6 87 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR4E2Q8NGC2 313 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR2T10Q8NGZ9 312 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF714Q96N38 554 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 PFDN5Q99471 154 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 LXNQ9BS40 222 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 PRADC1Q9BSG0 188 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 CACYBPQ9HB71 228 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 POPDC3Q9HBV1 291 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 NAT8BQ9UHF3 227 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 PAIP2BQ9ULR5 123 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 BCL9O00512 1426 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 FN1P02751 2386 aaKnown RBP1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 RIC1Q4ADV7 1423 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 VWDEQ8N2E2 1590 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 COL4A2P08572 1712 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 DSCAMO60469 2012 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 ARAP1Q96P48 1450 aa1.37□□□□□ -2.19
HMGB1P36-201ENST00000487709 NCKAP5O14513 1909 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 SDK1Q7Z5N4 2213 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 CUL9Q8IWT3 2517 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 ADAMTS7Q9UKP4 1686 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 A0A087WX48 190 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 GABARAPH6UMI1 98 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 SDCBPO00560 298 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 LYZL6O75951 148 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 NAPSAO96009 420 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 IFNA4P05014 189 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 FABP2P12104 132 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 COX4I1P13073 169 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 IL9P15248 144 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 GPX2P18283 190 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 SDC2P34741 201 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPL35P42766 123 aaKnown RBP1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMBIM6P55061 237 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 MED1Q15648 1581 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 FAM27BQ5VT28 67 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 HRCT1Q6UXD1 115 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 CD109Q6YHK3 1445 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 DEFB128Q7Z7B8 93 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 PDZD9Q8IXQ8 264 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 LINC00471Q8N535 108 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 SLC30A7Q8NEW0 376 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR5D16Q8NGK9 328 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 NPCDR1Q9BY65 106 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR2H1Q9GZK4 316 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 OTORQ9NRC9 128 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 COPZ2Q9P299 210 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 HSPB8Q9UJY1 196 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 HS3ST2Q9Y278 367 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 NCAPD3P42695 1498 aa1.36□□□□□ -2.19
HMGB1P36-201ENST00000487709 CR1P17927 2039 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 GBF1Q92538 1859 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF705FA8MVS1 300 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 HIST1H2BKO60814 126 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 DPM2O94777 84 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 HIST1H2BJP06899 126 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 CXCL1P09341 107 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 SCTP09683 121 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRGC1P0CF51 173 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 DEFA4P12838 97 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 HLA-EP13747 358 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 FKBP2P26885 142 aaKnown RBP1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 AQP4P55087 323 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 ARPP19P56211 112 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 HBBP68871 147 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 MSMO1Q15800 293 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 LCN15Q6UWW0 184 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 TCTE3Q8IZS6 198 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 CARD19Q96LW7 228 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 LINC00467Q9BRT7 94 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 BAIAP2Q9UQB8 552 aa1.35□□□□□ -2.19
HMGB1P36-201ENST00000487709 MED23Q9ULK4 1368 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 STRCP1A6NGW2 1772 aa1.34□□□□□ -2.19
HMGB1P36-201ENST00000487709 OVOS2A0A0G2JMS6 1433 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms