RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SFTPCP11686 197 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 PRTN3P24158 256 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 AMTP48728 403 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 SLAQ13239 276 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 DTX2Q86UW9 622 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 VN1R17PQ8TDU5 208 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 TMEM68Q96MH6 324 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 RBM14Q96PK6 669 aaKnown RBP20.75■□□□□ 0.91
HLA-C-208ENST00000487245 VAMP8Q9BV40 100 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 TMEM14CQ9P0S9 112 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 C1orf122Q6ZSJ8 110 aa20.74■□□□□ 0.91
HLA-C-208ENST00000487245 M0QZK8 103 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 LY6HO94772 140 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 OR4B1Q8NGF8 309 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 C18orf32Q8TCD1 76 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 BLNKQ8WV28 456 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 PRSS22Q9GZN4 317 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 RNF114Q9Y508 228 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 A0A1B0GXF2 115 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 CNIH1O95406 144 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 LTAP01374 205 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 GDF5OSQ5U4N7 250 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 C19orf35Q6ZS72 473 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 NPBQ8NG41 125 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 NEU1Q99519 415 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 HIGD1AQ9Y241 93 aa20.73■□□□□ 0.91
HLA-C-208ENST00000487245 NBR2O15453 112 aa20.72■□□□□ 0.91
HLA-C-208ENST00000487245 APELAP0DMC3 54 aa20.72■□□□□ 0.91
HLA-C-208ENST00000487245 MMDQ15546 238 aa20.72■□□□□ 0.91
HLA-C-208ENST00000487245 TDRG1Q3Y452 100 aa20.72■□□□□ 0.91
HLA-C-208ENST00000487245 SOX21Q9Y651 276 aaPredicted RBP20.72■□□□□ 0.91
HLA-C-208ENST00000487245 ODF3BA8MYP8 253 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 DIRC3C9JPN6 131 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 I3L2K1 104 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 IGLC1P0CG04 106 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 NIT1Q86X76 327 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 CFHR4Q92496 578 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 FAM103A1Q9BTL3 118 aaKnown RBP20.71■□□□□ 0.91
HLA-C-208ENST00000487245 WNT10AQ9GZT5 417 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 ANKHD1Q8IWZ3 2542 aaKnown RBP20.71■□□□□ 0.91
HLA-C-208ENST00000487245 C19orf71A6NCJ1 209 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 TCRAP04437 139 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 KRTDAPP60985 99 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 LDLRAD2Q5SZI1 272 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 KIR3DL3Q8N743 410 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 Q9H3A6 140 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 RPP21Q9H633 154 aaKnown RBP20.71■□□□□ 0.91
HLA-C-208ENST00000487245 OTORQ9NRC9 128 aa20.71■□□□□ 0.91
HLA-C-208ENST00000487245 NDUFA3O95167 84 aa20.7■□□□□ 0.9
HLA-C-208ENST00000487245 GPR6P46095 362 aaPredicted RBP20.7■□□□□ 0.9
HLA-C-208ENST00000487245 PRR27Q6MZM9 219 aa20.7■□□□□ 0.9
HLA-C-208ENST00000487245 HIGD1CA8MV81 97 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 PLXNB1O43157 2135 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 IGHV3-21A0A0B4J1V1 117 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 TRBV6-1A0A0K0K1D8 114 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 PMCHP20382 165 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 GFRA4Q9GZZ7 299 aa20.69■□□□□ 0.9
HLA-C-208ENST00000487245 A8MWL6 223 aa20.68■□□□□ 0.9
HLA-C-208ENST00000487245 OOSP1A8MZH6 123 aa20.68■□□□□ 0.9
HLA-C-208ENST00000487245 PSG1P11464 419 aa20.68■□□□□ 0.9
HLA-C-208ENST00000487245 CCDC144NLQ6NUI1 221 aa20.68■□□□□ 0.9
HLA-C-208ENST00000487245 ZNF705AQ6ZN79 300 aaPredicted RBP20.68■□□□□ 0.9
HLA-C-208ENST00000487245 ALKBH7Q9BT30 221 aaPredicted RBP20.68■□□□□ 0.9
HLA-C-208ENST00000487245 HILPDAQ9Y5L2 63 aa20.68■□□□□ 0.9
HLA-C-208ENST00000487245 PIEZO1Q92508 2521 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 ASPHD1Q5U4P2 390 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 PAM16Q9Y3D7 125 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 FAM231BA6NCW3 169 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 VWC2LB2RUY7 222 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 CTRLP40313 264 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 RASL11BQ9BPW5 248 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 DCHS1Q96JQ0 3298 aa20.67■□□□□ 0.9
HLA-C-208ENST00000487245 HOXB4P17483 251 aaPredicted RBP20.66■□□□□ 0.9
HLA-C-208ENST00000487245 SLC25A39Q9BZJ4 359 aaPredicted RBP20.66■□□□□ 0.9
HLA-C-208ENST00000487245 TCAPO15273 167 aa20.65■□□□□ 0.9
HLA-C-208ENST00000487245 C3orf79P0CE67 100 aa20.65■□□□□ 0.9
HLA-C-208ENST00000487245 NPIPB6E9PJ23 425 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 LYZP61626 148 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 HBBP68871 147 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 KLRD1Q13241 179 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 MINOS1Q5TGZ0 78 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 GSX1Q9H4S2 264 aaPredicted RBP20.64■□□□□ 0.9
HLA-C-208ENST00000487245 RNF24Q9Y225 148 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 MINOS1-NBL1R4GNA1 71 aa20.64■□□□□ 0.9
HLA-C-208ENST00000487245 P01737 135 aa20.64■□□□□ 0.89
HLA-C-208ENST00000487245 C5orf64Q2M2E5 130 aa20.64■□□□□ 0.89
HLA-C-208ENST00000487245 FAM162BQ5T6X4 162 aa20.64■□□□□ 0.89
HLA-C-208ENST00000487245 LINC00322Q6ZN03 302 aaPredicted RBP20.64■□□□□ 0.89
HLA-C-208ENST00000487245 LHFPL4Q7Z7J7 247 aa20.63■□□□□ 0.89
HLA-C-208ENST00000487245 Q86TA4 180 aa20.63■□□□□ 0.89
HLA-C-208ENST00000487245 BORCS7Q96B45 105 aa20.63■□□□□ 0.89
HLA-C-208ENST00000487245 RPH3ALQ9UNE2 315 aa20.63■□□□□ 0.89
HLA-C-208ENST00000487245 SPTBN4Q9H254 2564 aa20.63■□□□□ 0.89
HLA-C-208ENST00000487245 K7EIM0 57 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 IGKV1-17P01599 117 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 LEMD1Q68G75 181 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 SPTA1P02549 2419 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 HES1Q14469 280 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 C16orf54Q6UWD8 224 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 PRORYQ9H606 182 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms