RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
EPHB4-206ENST00000487222 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
EPHB4-206ENST00000487222 BMPERQ8N8U9 685 aa12.06□□□□□ -0.48
EPHB4-206ENST00000487222 ZNF815PA8K554 130 aa12.06□□□□□ -0.48
EPHB4-206ENST00000487222 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
EPHB4-206ENST00000487222 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
EPHB4-206ENST00000487222 IGHV1-3A0A0C4DH29 117 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 Q6ZRM9 215 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 PRSS22Q9GZN4 317 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 MYO7BQ6PIF6 2116 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 OOSP1A8MZH6 123 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 TRAV8-2A0A0B4J237 113 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 H0YJW9 148 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 ARTNQ5T4W7 220 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 SIGLEC15Q6ZMC9 328 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 CACNA1BQ00975 2339 aa12.05□□□□□ -0.48
EPHB4-206ENST00000487222 LRRK1Q38SD2 2015 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 MDS2Q8NDY4 140 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 DIDO1Q9BTC0 2240 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 MRPL27Q9P0M9 148 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 D6R8Y8 96 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 RBMY1A1P0DJD3 496 aaKnown RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 RBMY1CP0DJD4 496 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 PLNP26678 52 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 SFTA2Q6UW10 78 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 SLX1AQ9BQ83 275 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 IGKV2-40A0A087WW87 121 aaPredicted RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 IGKV2D-40P01614 121 aaPredicted RBP12.04□□□□□ -0.48
EPHB4-206ENST00000487222 WNT2P09544 360 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 NUP35Q8NFH5 326 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 YAE1D1Q9NRH1 226 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 CRIM1Q9NZV1 1036 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 PKDREJQ9NTG1 2253 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 LAGE3Q14657 143 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 C15orf32Q32M92 178 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 WNK2Q9Y3S1 2297 aa12.04□□□□□ -0.48
EPHB4-206ENST00000487222 C3orf79P0CE67 100 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 TRAV41A0A0B4J266 112 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 TPTE2P1Q5T6R2 138 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 A6NNC1 897 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 SMAD7O15105 426 aaKnown RBP12.03□□□□□ -0.48
EPHB4-206ENST00000487222 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
EPHB4-206ENST00000487222 TCF20Q9UGU0 1960 aaKnown RBP12.03□□□□□ -0.48
EPHB4-206ENST00000487222 IGKV1D-17A0A075B6S4 117 aa12.02□□□□□ -0.48
EPHB4-206ENST00000487222 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.48
EPHB4-206ENST00000487222 SAMD5Q5TGI4 173 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 MINOS1Q5TGZ0 78 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 LYPD1Q8N2G4 141 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 GAFA1Q96PS6 74 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 NCR2O95944 276 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 TDGF1P13385 188 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.49
EPHB4-206ENST00000487222 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 KIAA2026Q5HYC2 2103 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 DLEU1O43261 78 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 CD28P10747 220 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.49
EPHB4-206ENST00000487222 TRAV2A0A0B4J234 112 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 VDAC2P45880 294 aaPredicted RBP12.01□□□□□ -0.49
EPHB4-206ENST00000487222 PAX2Q02962 417 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 CD300EQ496F6 205 aaPredicted RBP12.01□□□□□ -0.49
EPHB4-206ENST00000487222 STHQ8IWL8 128 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 RNASE2P10153 161 aaKnown RBP12.01□□□□□ -0.49
EPHB4-206ENST00000487222 E9PQ18 207 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 ZNF138P52744 262 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 LCN12Q6JVE5 192 aa12.01□□□□□ -0.49
EPHB4-206ENST00000487222 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 MBD3L4A6NDZ8 208 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 MBD3L3A6NE82 208 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 MBD3L5A6NJ08 208 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 C5orf64Q2M2E5 130 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 MBD3L2Q8NHZ7 208 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 C9JQL5 133 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 MRPL52Q86TS9 123 aaKnown RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 PLXNA3P51805 1871 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 A8MWV9 139 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 ETV2O00321 342 aaPredicted RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
EPHB4-206ENST00000487222 ANAPC10Q9UM13 185 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 IGKV3D-20A0A0C4DH25 116 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 ITGB1BP1O14713 200 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 LINC00205P59089 165 aa12□□□□□ -0.49
EPHB4-206ENST00000487222 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms