RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PSMB3P49720 205 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 SPCS2Q15005 226 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 ZNF79Q15937 498 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 OR51S1Q8NGJ8 323 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 PBDC1Q9BVG4 233 aa13.75□□□□□ -0.21
SMPDL3A-202ENST00000487215 ID1P41134 155 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 TMBIM6P55061 237 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 GSG1LQ6UXU4 331 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 COQ8AQ8NI60 647 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 C7orf50Q9BRJ6 194 aaKnown RBP13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 PFDN2Q9UHV9 154 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 TMED3Q9Y3Q3 217 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 U3KQ87 197 aa13.74□□□□□ -0.21
SMPDL3A-202ENST00000487215 ANKRD20A5PA0PJZ0 165 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 F6UB75 175 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 ANXA3P12429 323 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 CCR6P51684 374 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 DAD1P61803 113 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 SRPXP78539 464 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 PSG9Q00887 426 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 RRN3P1Q2M238 152 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 MAPKAPK5-AS1Q8N8E1 139 aa13.73□□□□□ -0.21
SMPDL3A-202ENST00000487215 A0A0B4J2A0 478 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 NOL3O60936 208 aaKnown RBP13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 PAX9P55771 341 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 SPATA31B1PQ5VZV4 182 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 C15orf53Q8NAA6 179 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 SHPKQ9UHJ6 478 aa13.72□□□□□ -0.21
SMPDL3A-202ENST00000487215 APOBP04114 4563 aaKnown RBP13.71□□□□□ -0.21
SMPDL3A-202ENST00000487215 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
SMPDL3A-202ENST00000487215 SMCO1Q147U7 214 aa13.71□□□□□ -0.21
SMPDL3A-202ENST00000487215 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.21
SMPDL3A-202ENST00000487215 MCUBQ9NWR8 336 aa13.71□□□□□ -0.21
SMPDL3A-202ENST00000487215 A0A0J9YX75 114 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 AKR1C4P17516 323 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 FAUP35544 74 aaKnown RBP13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 ZNF90Q03938 601 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 KLF9Q13886 244 aaPredicted RBP13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 LGI3Q8N145 548 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 HSPB7Q9UBY9 170 aa13.7□□□□□ -0.22
SMPDL3A-202ENST00000487215 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
SMPDL3A-202ENST00000487215 FABP12A6NFH5 140 aa13.69□□□□□ -0.22
SMPDL3A-202ENST00000487215 ZFP92A6NM28 416 aa13.69□□□□□ -0.22
SMPDL3A-202ENST00000487215 ISLRO14498 428 aa13.69□□□□□ -0.22
SMPDL3A-202ENST00000487215 FABP1P07148 127 aa13.69□□□□□ -0.22
SMPDL3A-202ENST00000487215 DNAH5Q8TE73 4624 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 NBDYA0A0U1RRE5 68 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 GPX4P36969 197 aaPredicted RBP13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 LYZP61626 148 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 ZNRF2Q8NHG8 242 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
SMPDL3A-202ENST00000487215 DUXBA0A1W2PPF3 345 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 A8MTW9 85 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 AP3S2P59780 193 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 GAMTQ14353 236 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 AMTNQ6UX39 209 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 OR1S1Q8NH92 325 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 IGF2BP2-AS1Q96M15 143 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 TMEM208Q9BTX3 173 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 RBKSQ9H477 322 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 DOK5Q9P104 306 aa13.67□□□□□ -0.22
SMPDL3A-202ENST00000487215 TNFSF8P32971 234 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 OR8I2Q8N0Y5 310 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 PPP1R14BQ96C90 147 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 SLC35E1Q96K37 410 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 SOSTQ9BQB4 213 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 SLIRPQ9GZT3 109 aaKnown RBP13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 RPRMQ9NS64 109 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 PRR13Q9NZ81 148 aa13.66□□□□□ -0.22
SMPDL3A-202ENST00000487215 PRM2P04554 102 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 RAB11AP62491 216 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 OR2F1Q13607 317 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 SAMD13Q5VXD3 122 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 MCFD2Q8NI22 146 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
SMPDL3A-202ENST00000487215 LYRM9A8MSI8 78 aa13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 ZNF705GA8MUZ8 300 aaPredicted RBP13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 SNRPGP15A8MWD9 76 aa13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 TMEM128Q5BJH2 165 aa13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 Q8N1X5 172 aa13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 DEDD2Q8WXF8 326 aa13.64□□□□□ -0.23
SMPDL3A-202ENST00000487215 H3BMQ9 156 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 MED6O75586 246 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 NUDT3O95989 172 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 DEFB130BP0DP73 79 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 DEFB130AP0DP74 79 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 SLC25A6P12236 298 aa13.63□□□□□ -0.23
SMPDL3A-202ENST00000487215 MEOX2P50222 304 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms