RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 SVILO95425 2214 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 PINLYPA6NC86 204 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 IQCF6A8MYZ5 107 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 VWC2LB2RUY7 222 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 ARMS2P0C7Q2 107 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 MAGEA5P43359 124 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 WFDC2Q14508 124 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 CCDC144NLQ6NUI1 221 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SH2D6Q7Z4S9 175 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 UBALD2Q8IYN6 164 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 CIARTQ8N365 385 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 NEU4Q8WWR8 484 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 CACNG8Q8WXS5 425 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 Q9H3A6 140 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 RP1L1Q8IWN7 2480 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 TET2Q6N021 2002 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 F8W1H4 67 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 APOMO95445 188 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 RNASE2P10153 161 aaKnown RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 PRR7Q8TB68 274 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 SMPXQ9UHP9 88 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 TRAV8-1A0A0A6YYK1 113 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 TCRBV4S1A1TA0A5B7 111 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 D6R8Y8 96 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 C15orf65H3BRN8 121 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 FXYD2P54710 66 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 IL11RAQ14626 422 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 SLC25A48Q6ZT89 311 aaKnown RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 FXYD5Q96DB9 178 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 MRPL16Q9NX20 251 aaKnown RBP5.05□□□□□ -1.6
VPS13D-209ENST00000487188 CYSLTR1Q9Y271 337 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 HAX1O00165 279 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 TCRAP04437 139 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 SPINK8P0C7L1 97 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 CCL4P13236 92 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 CKS2P33552 79 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 LYZP61626 148 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 TCTEX1D4Q5JR98 221 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 ORMDL3Q8N138 153 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 ZNRF1Q8ND25 227 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 HIST1H4GQ99525 98 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 PLSCR4Q9NRQ2 329 aa5.05□□□□□ -1.6
VPS13D-209ENST00000487188 IGHV3-21A0A0B4J1V1 117 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1B0GW15 77 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1W2PRD5 423 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1W2PRF3 423 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1W2PRM7 423 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 H3BMG7 143 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 PROP1O75360 226 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 SAA1P0DJI8 122 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 FGF6P10767 208 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 GCSAMQ8N6F7 178 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 CD177Q8N6Q3 437 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 CNEP1R1Q8N9A8 125 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 DEFB108BQ8NET1 73 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 AHCTF1Q8WYP5 2266 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 TNRC6BQ9UPQ9 1833 aaKnown RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 NCKAP5O14513 1909 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 NKX2-8O15522 239 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 CFHR2P36980 270 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 LINC00322Q6ZN03 302 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 Q86TA4 180 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 TTC9CQ8N5M4 171 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 FAM169BQ8N8A8 192 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ITLN1Q8WWA0 313 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 SPANXB1Q9NS25 103 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 WDR87Q6ZQQ6 2873 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF318Q5VUA4 2279 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 AGFG2O95081 481 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF134P52741 427 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 SSBP2P81877 361 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ATP5G2Q06055 141 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 SPAG8Q99932 426 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-209ENST00000487188 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 HES7Q9BYE0 225 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 INSIG2Q9Y5U4 225 aa5.04□□□□□ -1.6
VPS13D-209ENST00000487188 RIF1Q5UIP0 2472 aaKnown RBP5.03□□□□□ -1.6
VPS13D-209ENST00000487188 DYSFO75923 2080 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 CFIP05156 583 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 FAM222BQ8WU58 562 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 FER1L6-AS2Q96M78 137 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 DEFB127Q9H1M4 99 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 SIGLEC8Q9NYZ4 499 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 NPIPB6E9PJ23 425 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-209ENST00000487188 GTSCR1Q86UQ5 136 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 SYT8Q8NBV8 401 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 FOXC2Q99958 501 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 HIGD1AQ9Y241 93 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 TMEM189A5PLL7 270 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 ENSAO43768 121 aaKnown RBP5.03□□□□□ -1.6
VPS13D-209ENST00000487188 LTAP01374 205 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 PRB4P10163 310 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-209ENST00000487188 PSMG4Q5JS54 123 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 Q6AWC8 147 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 MOGAT3Q86VF5 341 aa5.03□□□□□ -1.6
VPS13D-209ENST00000487188 SPATA25Q9BR10 227 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms