RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 ZADH2Q8N4Q0 377 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 LOC400499M0QZD8 3231 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 PPIAL4EA0A075B759 164 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 PPIAL4DF5H284 164 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 ENSAO43768 121 aaKnown RBP9.75□□□□□ -0.85
COL3A1-206ENST00000487010 CEACAM4O75871 244 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 APOHP02749 345 aaPredicted RBP9.75□□□□□ -0.85
COL3A1-206ENST00000487010 PPIAL4FP0DN26 164 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 VAMP3Q15836 100 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 BVES-AS1Q5T3Y7 98 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 Q86TA4 180 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 SCRT2Q9NQ03 307 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 OTORQ9NRC9 128 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.74□□□□□ -0.85
COL3A1-206ENST00000487010 IGHV3-21A0A0B4J1V1 117 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 TAX1BP3O14907 124 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 NDUFB3O43676 98 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 NUDT3O95989 172 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 COL8A1P27658 744 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 CDKN1BP46527 198 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 DLX6P56179 175 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 C16orf54Q6UWD8 224 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 LYPD2Q6UXB3 125 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 CIARTQ8N365 385 aaPredicted RBP9.74□□□□□ -0.85
COL3A1-206ENST00000487010 TEX45Q8NA69 505 aa9.74□□□□□ -0.85
COL3A1-206ENST00000487010 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 OVOL3O00110 214 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
COL3A1-206ENST00000487010 PLXNB1O43157 2135 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
COL3A1-206ENST00000487010 ZNF138P52744 262 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 RHOGP84095 191 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 ADIPOQQ15848 244 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 DEFB124Q8NES8 71 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 HSPB8Q9UJY1 196 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 HIGD1AQ9Y241 93 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 PLCE1Q9P212 2302 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 IGHV3-72A0A0B4J1Y9 119 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 IGLV2-11P01706 119 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 FTH1P19P0C7X4 201 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 APELAP0DMC3 54 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 CEACAM8P31997 349 aaPredicted RBP9.73□□□□□ -0.85
COL3A1-206ENST00000487010 PAX2Q02962 417 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 DEFB125Q8N687 156 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 TMUB1Q9BVT8 246 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 GSX1Q9H4S2 264 aaPredicted RBP9.73□□□□□ -0.85
COL3A1-206ENST00000487010 TMEM14CQ9P0S9 112 aa9.73□□□□□ -0.85
COL3A1-206ENST00000487010 CRYGBP07316 175 aa9.72□□□□□ -0.85
COL3A1-206ENST00000487010 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
COL3A1-206ENST00000487010 TMEM108Q6UXF1 575 aa9.72□□□□□ -0.85
COL3A1-206ENST00000487010 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
COL3A1-206ENST00000487010 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 HLA-DRB1P01911 266 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 HTR1DP28221 377 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.85
COL3A1-206ENST00000487010 MUC21Q5SSG8 566 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 Q71RC1 249 aaPredicted RBP9.71□□□□□ -0.85
COL3A1-206ENST00000487010 ERASQ7Z444 233 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 NEU4Q8WWR8 484 aaPredicted RBP9.71□□□□□ -0.85
COL3A1-206ENST00000487010 CCL17Q92583 94 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 MCRIP2Q9BUT9 160 aaKnown RBP9.71□□□□□ -0.85
COL3A1-206ENST00000487010 CTSZQ9UBR2 303 aa9.71□□□□□ -0.85
COL3A1-206ENST00000487010 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 IGHV1-8P0DP01 117 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 PSG1P11464 419 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 CNTFRP26992 372 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
COL3A1-206ENST00000487010 LYZP61626 148 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 LINC01545Q5VT33 79 aa9.71□□□□□ -0.86
COL3A1-206ENST00000487010 SLC25A39Q9BZJ4 359 aaPredicted RBP9.71□□□□□ -0.86
COL3A1-206ENST00000487010 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.86
COL3A1-206ENST00000487010 H0Y8G0 127 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 CSN3P07498 182 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 IGLC1P0CG04 106 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 SIGLEC9Q9Y336 463 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 OR2T8A6NH00 312 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 HIST1H1AQ02539 215 aaPredicted RBP9.7□□□□□ -0.86
COL3A1-206ENST00000487010 RIGQ13278 110 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 SAPCD1Q5SSQ6 148 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 IGFL3Q6UXB1 125 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 WFDC8Q8IUA0 241 aa9.7□□□□□ -0.86
COL3A1-206ENST00000487010 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
COL3A1-206ENST00000487010 ZC2HC1AQ96GY0 325 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms