RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CACNG7P62955 275 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 PSG3Q16557 428 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-208ENST00000486641 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 FAM222BQ8WU58 562 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 F11RQ9Y624 299 aaKnown RBP8.54□□□□□ -1.04
CCDC171-208ENST00000486641 TRAV8-1A0A0A6YYK1 113 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 NKX2-8O15522 239 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 NMUP48645 174 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 FXYD7P58549 80 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 ERHP84090 104 aaKnown RBP8.54□□□□□ -1.04
CCDC171-208ENST00000486641 RPRMLQ8N4K4 120 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 PPP1R35Q8TAP8 253 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 C18orf15Q96N68 181 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-208ENST00000486641 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
CCDC171-208ENST00000486641 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 FBLL1A6NHQ2 334 aaKnown RBP8.53□□□□□ -1.04
CCDC171-208ENST00000486641 ABHD17BQ5VST6 288 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 PRR14LQ5THK1 2151 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 KBTBD11-OT1A0A1B0GTJ5 212 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 SRRM5B3KS81 715 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 FTH1P19P0C7X4 201 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 CFHR2P36980 270 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 RUSC1-AS1Q66K80 236 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 ZNF788Q6ZQV5 615 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 Q9H3A6 140 aa8.53□□□□□ -1.04
CCDC171-208ENST00000486641 ZNF785A8K8V0 405 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 M0R296 226 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 RAB9AP51151 201 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 DHRS13Q6UX07 377 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 SLC25A48Q6ZT89 311 aaKnown RBP8.52□□□□□ -1.05
CCDC171-208ENST00000486641 GCSAMQ8N6F7 178 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 THAP8Q8NA92 274 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 STXBP6Q8NFX7 210 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
CCDC171-208ENST00000486641 RND1Q92730 232 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.05
CCDC171-208ENST00000486641 VGLL1Q99990 258 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 hADV38S2A0JD32 116 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 GCSHP23434 173 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 FXYD2P54710 66 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 RIGQ13278 110 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 WFDC2Q14508 124 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 INO80CQ6PI98 192 aaPredicted RBP8.52□□□□□ -1.05
CCDC171-208ENST00000486641 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 DEFB127Q9H1M4 99 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 SIGLEC8Q9NYZ4 499 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 DMDP11532 3685 aa8.52□□□□□ -1.05
CCDC171-208ENST00000486641 ARFGEF3Q5TH69 2177 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 K7ERJ3 54 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 NTN3O00634 580 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-208ENST00000486641 DUX4L9Q6RFH8 374 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-208ENST00000486641 Q86TA4 180 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 BCL6BQ8N143 479 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-208ENST00000486641 ASCL2Q99929 193 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 SH3BGRL2Q9UJC5 107 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 TANC2Q9HCD6 1990 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 SPAARA0A1B0GVQ0 90 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 C22orf46C9J442 243 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 IGLV2-11P01706 119 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 CKS1BP61024 79 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 FAM201AQ5SY85 155 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 ZCCHC24Q8N2G6 241 aaKnown RBP8.51□□□□□ -1.05
CCDC171-208ENST00000486641 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
CCDC171-208ENST00000486641 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-208ENST00000486641 DSCAML1Q8TD84 2053 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
CCDC171-208ENST00000486641 GP9P14770 177 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 C10orf55Q5SWW7 151 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 PHLDA1Q8WV24 401 aaPredicted RBP8.5□□□□□ -1.05
CCDC171-208ENST00000486641 ZNF414Q96IQ9 312 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 SPATA25Q9BR10 227 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
CCDC171-208ENST00000486641 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 D6R8Y8 96 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 IGKV3-15P01624 115 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-208ENST00000486641 MEOX1P50221 254 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 HARBI1Q96MB7 349 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 SPAG8Q99932 426 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-208ENST00000486641 TPPP3Q9BW30 176 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 DSCAMO60469 2012 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 SH2D6Q7Z4S9 175 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 SPRR3Q9UBC9 169 aa8.49□□□□□ -1.05
CCDC171-208ENST00000486641 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms