RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TENM2Q9NT68 2774 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 C7orf66A4D0T2 115 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 L7N2F9 121 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 CFDP00746 253 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-206ENST00000485870 ORM2P19652 201 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 VAMP2P63027 116 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 DLK1P80370 383 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 IFITM3Q01628 133 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 C1orf194Q5T5A4 169 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
COL1A1-206ENST00000485870 OR10P1Q8NGE3 313 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 FBXL17Q9UF56 701 aa13.5□□□□□ -0.25
COL1A1-206ENST00000485870 GSG1LQ6UXU4 331 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 CYP2G1PQ6ZSU1 146 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 OR1B1Q8NGR6 318 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 GATAD1Q8WUU5 269 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 BATF3Q9NR55 127 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 MGAT4CQ9UBM8 478 aa13.49□□□□□ -0.25
COL1A1-206ENST00000485870 K7EPK0 472 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 IL5P05113 134 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 BCAP31P51572 246 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 EWSR1Q01844 656 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL1A1-206ENST00000485870 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 RARRES2Q99969 163 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 TMEM147Q9BVK8 224 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 SLC25A22Q9H936 323 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 DOK5Q9P104 306 aa13.48□□□□□ -0.25
COL1A1-206ENST00000485870 RYR2Q92736 4967 aa13.47□□□□□ -0.25
COL1A1-206ENST00000485870 S100A10P60903 97 aa13.47□□□□□ -0.25
COL1A1-206ENST00000485870 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
COL1A1-206ENST00000485870 NPVFQ9HCQ7 196 aa13.47□□□□□ -0.25
COL1A1-206ENST00000485870 SEPSECSQ9HD40 501 aaKnown RBP13.47□□□□□ -0.25
COL1A1-206ENST00000485870 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
COL1A1-206ENST00000485870 ZNF98A6NK75 572 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 FNDC10F2Z333 226 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 SPP1P10451 314 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 C4BPBP20851 252 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 MORN3Q6PF18 240 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-206ENST00000485870 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 LINC00052Q96N35 136 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 SLC25A32Q9H2D1 315 aa13.46□□□□□ -0.25
COL1A1-206ENST00000485870 GPN1Q9HCN4 374 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-206ENST00000485870 SACSQ9NZJ4 4579 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 GIG44P09565 113 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-206ENST00000485870 LINC00869P0C866 280 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 ID1P41134 155 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 CAV2P51636 162 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 TEPPQ6URK8 271 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 LYSTQ99698 3801 aa13.45□□□□□ -0.26
COL1A1-206ENST00000485870 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 FAM24AA6NFZ4 105 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 SOCS3O14543 225 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 PVALBP20472 110 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-206ENST00000485870 S100A7P31151 101 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 GALR1P47211 349 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 DEFB1P60022 68 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 SELENOTP62341 195 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 RAB32Q13637 225 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 TMEM217Q8N7C4 229 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 C11orf1Q9H5F2 150 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 CLEC5AQ9NY25 188 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
COL1A1-206ENST00000485870 H3BMM0 161 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 H3BRN7 92 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 HYPMO75409 117 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 DEDDO75618 318 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 CST7O76096 145 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 OR5G3P0C626 314 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 PSMB3P49720 205 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 RAP2BP61225 183 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 IL15RAQ13261 267 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 RSG1Q9BU20 258 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 GGACTQ9BVM4 153 aa13.43□□□□□ -0.26
COL1A1-206ENST00000485870 SLC25A39Q9BZJ4 359 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-206ENST00000485870 LCE6AA0A183 80 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 INMT-MINDY4F8WBC2 141 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 GOSR2O14653 212 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 SIX6O95475 246 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 HLA-DRB4P13762 266 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 DEFA1P59665 94 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 DEFA3P59666 94 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 GDF5OSQ5U4N7 250 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 C16orf92Q96LL3 132 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 SHANK2-AS3Q9BTD1 123 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 ARL6Q9H0F7 186 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 HLA-DRB4X5D2U9 266 aa13.42□□□□□ -0.26
COL1A1-206ENST00000485870 ISLRO14498 428 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 AGPAT2O15120 278 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 DEFB4AO15263 64 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 PRAF2O60831 178 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 IGKV3-20P01619 116 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 MEOX2P50222 304 aa13.41□□□□□ -0.26
COL1A1-206ENST00000485870 PLP1P60201 277 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms