RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DEFB131AP59861 70 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 GINS1Q14691 196 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 KISS1Q15726 138 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 HSP90B2PQ58FF3 399 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 SAMD4BQ5PRF9 694 aaKnown RBP2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 FAM222AQ5U5X8 452 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 Q5W150 140 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 RPL13AP3Q6NVV1 102 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 Q6ZN92 141 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 UTS2BQ765I0 119 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 FAM223AQ8IWN6 122 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 SLC35F2Q8IXU6 374 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 C15orf53Q8NAA6 179 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 NECAP1Q8NC96 275 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 MNS1Q8NEH6 495 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 MRPL30Q8TCC3 161 aaKnown RBP2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 NEK7Q8TDX7 302 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 GPX8Q8TED1 209 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 DEFB104AQ8WTQ1 72 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 MITD1Q8WV92 249 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 TNFAIP8L1Q8WVP5 186 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 PHB2Q99623 299 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 SH3GL1Q99961 368 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 AGMATQ9BSE5 352 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 C20orf24Q9BUV8 137 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 SLC2A9Q9NRM0 540 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 TRAPPC2LQ9UL33 140 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 BAIAP2Q9UQB8 552 aa2.3□□□□□ -2.04
SMARCC1-207ENST00000485833 A0A087WTM6 91 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 IGHV3-66A0A0C4DH42 116 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 OR4C46A6NHA9 309 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 OR5H14A6NHG9 310 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 TNFRSF11BO00300 401 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 DYNC1I1O14576 645 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 E2F6O75461 281 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 CCNB2O95067 398 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 TMEM50AO95807 157 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 NPPAP01160 153 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 OXTP01178 125 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 KCNJ3P48549 501 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 UBE2AP49459 152 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 DEFB1P60022 68 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 TNXAQ16473 311 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 PRSS8Q16651 343 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 COQ5Q5HYK3 327 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 TMEM69Q5SWH9 247 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 GLYATQ6IB77 296 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 MORN3Q6PF18 240 aaPredicted RBP2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 UQCC3Q6UW78 93 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 GAPTQ8N292 157 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 OR2G2Q8NGZ5 317 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 ZNF502Q8TBZ5 544 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 TEX47Q8TBZ9 253 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 ASB17Q8WXJ9 295 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 PP6455Q8WZ26 134 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 PYURFQ96I23 114 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 ZNF436Q9C0F3 470 aaPredicted RBP2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 SAR1AQ9NR31 198 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 MRPL27Q9P0M9 148 aaKnown RBP2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 JPT1Q9UK76 154 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 ST3GAL6Q9Y274 331 aa2.29□□□□□ -2.04
SMARCC1-207ENST00000485833 IGHV3-21A0A0B4J1V1 117 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 A0A0G2JND7 137 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 OR2T8A6NH00 312 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 H3BN98 237 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 YPEL1O60688 119 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 FABP3P05413 133 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 IFNGR2P38484 337 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 SMIM11AP58511 58 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 FXYD7P58549 80 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 RAB11AP62491 216 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 CDK5Q00535 292 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 HMGN3Q15651 99 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 RAB11BQ15907 218 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 SSX7Q7RTT5 188 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 VKORC1L1Q8N0U8 176 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 TTC9CQ8N5M4 171 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 PXT1Q8NFP0 134 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 OR52N1Q8NH53 320 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 ACOT12Q8WYK0 555 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 TLCD1Q96CP7 247 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 YPEL2Q96QA6 119 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 TSNAXQ99598 290 aaKnown RBP2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 NDFIP1Q9BT67 221 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 BANF2Q9H503 90 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 RNF167Q9H6Y7 350 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 CLN6Q9NWW5 311 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 TAS2R4Q9NYW5 299 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 TVP23BQ9NYZ1 205 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 XCL2Q9UBD3 114 aa2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 V9GYY5 206 aaPredicted RBP2.28□□□□□ -2.04
SMARCC1-207ENST00000485833 IGKV1-6A0A0C4DH72 117 aa2.27□□□□□ -2.05
SMARCC1-207ENST00000485833 LOC100506127A0A0U1RQW1 187 aa2.27□□□□□ -2.05
SMARCC1-207ENST00000485833 METTL15A6NJ78 407 aa2.27□□□□□ -2.05
SMARCC1-207ENST00000485833 OR4C45A6NMZ5 311 aa2.27□□□□□ -2.05
SMARCC1-207ENST00000485833 BBIP1A8MTZ0 92 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms