RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FAM182AQ5T1J6 154 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 MRPL2Q5T653 305 aaKnown RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 OR2T2Q6IF00 324 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 UNQ9165/PRO28630Q6UXU0 137 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 LINC00173Q6ZV60 143 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 LCA10Q71F78 164 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 PRNTQ86SH4 94 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 ATP6V0E2Q8NHE4 81 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 RBMXL1Q96E39 390 aaKnown RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 PGLYRP2Q96PD5 576 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 SLC25A2Q9BXI2 301 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 POLR2J2Q9GZM3 115 aaKnown RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 C6orf106Q9H6K1 298 aaPredicted RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 NPVFQ9HCQ7 196 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 SLC39A9Q9NUM3 307 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 MOB4Q9Y3A3 225 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 XIRP1Q702N8 1843 aaKnown RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 ZNF106Q9H2Y7 1883 aaKnown RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 SIP14410 1827 aa3.4□□□□□ -1.86
RTN4-213ENST00000485749 MYH11P35749 1972 aa3.4□□□□□ -1.86
RTN4-213ENST00000485749 TRAV19A0A0A6YYK7 116 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 EPOPA6NHQ4 379 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 A8MUN3 132 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 SMIM1B2RUZ4 78 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 K7N7A8 449 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 M0R129 80 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 DUSP14O95147 198 aaKnown RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 NDUFB2O95178 105 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 IGHG1P01857 330 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 TCRAP04437 139 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 SRP19P09132 144 aaKnown RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 SLC25A4P12235 298 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 TPT1P13693 172 aaKnown RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 HLA-DRB4P13762 266 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 AQP1P29972 269 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 LSM3P62310 102 aaKnown RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 SP6Q3SY56 376 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 EBLN2Q6P2I7 272 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 BPIFA4PQ86YQ2 179 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 RFLNBQ8N5W9 214 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 OTOSQ8NHW6 89 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 ZNF721Q8TF20 911 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 TSLPQ969D9 159 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 MAL2Q969L2 176 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 NABP1Q96AH0 204 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 ZC2HC1AQ96GY0 325 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 ZNF71Q9NQZ8 489 aaPredicted RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 TXNL4BQ9NX01 149 aaKnown RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 NRXN2Q9P2S2 1712 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 ZNF706Q9Y5V0 76 aaPredicted RBP3.4□□□□□ -1.87
RTN4-213ENST00000485749 HLA-DRB4X5D2U9 266 aa3.4□□□□□ -1.87
RTN4-213ENST00000485749 ADAMTSL1Q8N6G6 1762 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 TRBV20-1A0A075B6N2 111 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 IGHV3-20A0A0C4DH32 117 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 IGLC7A0M8Q6 106 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ZFP92A6NM28 416 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ZNF727A8MUV8 499 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 C9JQL5 133 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 FAM72CH0Y354 149 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 K7EQD1 137 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 SFT2D2O95562 160 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HLA-DPB1P04440 258 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 CRYGAP11844 174 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 IGHV1-2P23083 117 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ASIPP42127 132 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 NMUP48645 174 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ZNF138P52744 262 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 TAS2R45P59539 299 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 RPL23P62829 140 aaKnown RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 UBE2BP63146 152 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HBBP68871 147 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 CYCSP99999 105 aaKnown RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 Q0VG73 95 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 FAM72AQ5TYM5 149 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 LAIR2Q6ISS4 152 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 FAM72DQ6L9T8 149 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 C19orf48Q6RUI8 117 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 FAM72BQ86X60 149 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 RPP25LQ8N5L8 163 aaKnown RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 WFDC11Q8NEX6 87 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 OR5H2Q8NGV7 314 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 H1FXQ92522 213 aaKnown RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 ZNF799Q96GE5 643 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
RTN4-213ENST00000485749 HDHD3Q9BSH5 251 aaPredicted RBP3.39□□□□□ -1.87
RTN4-213ENST00000485749 AGPAT4-IT1Q9H0P7 198 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms