RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 HEYLQ9NQ87 328 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 RFNGQ9Y644 331 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 BUB3O43684 328 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 SFT2D2O95562 160 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 VAMP1P23763 118 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 NUP62P37198 522 aaPredicted RBP9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 Q6ZR54 194 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 KCNIP3Q9Y2W7 256 aa9.81□□□□□ -0.84
SMARCD3-211ENST00000485592 RYR1P21817 5038 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 UPK1BO75841 260 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 TOMM40O96008 361 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 IGKV3-20P01619 116 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 RD3LP0DJH9 198 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 HTN3P15516 51 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 ANXA7P20073 488 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 SRPXP78539 464 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 RNF212Q495C1 297 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 C1orf134Q5TEV5 83 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 NOXA1Q86UR1 476 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 LGI3Q8N145 548 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 WDR12Q9GZL7 423 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 C20orf85Q9H1P6 137 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 DKK2Q9UBU2 259 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
SMARCD3-211ENST00000485592 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 C9orf170A2RU37 121 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 CENPXA8MT69 81 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 NXPH3O95157 252 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 ANXA3P12429 323 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 ID1P41134 155 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 FXYD7P58549 80 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 ASAH1Q13510 395 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF846Q147U1 533 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 NPIPB3Q92617 1050 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 ACY3Q96HD9 319 aa9.79□□□□□ -0.84
SMARCD3-211ENST00000485592 DNAH11Q96DT5 4516 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 DUXBA0A1W2PPF3 345 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 PITX3O75364 302 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 HBE1P02100 147 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 OR4E1P0C645 316 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 GDF5OSQ5U4N7 250 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 FOXI2Q6ZQN5 318 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 OR4B1Q8NGF8 309 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 COQ8AQ8NI60 647 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 TMEM170AQ8WVE7 144 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 RNF125Q96EQ8 232 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 LINC00052Q96N35 136 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 SAV1Q9H4B6 383 aaPredicted RBP9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 NUDT15Q9NV35 164 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 CACFD1Q9UGQ2 172 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 GOLT1BQ9Y3E0 138 aa9.78□□□□□ -0.84
SMARCD3-211ENST00000485592 PKD1P98161 4303 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 TCRBP04435 133 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 PSG1P11464 419 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 PSMB3P49720 205 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 SMCO1Q147U7 214 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 OXA1LQ15070 435 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 SPATA31B1PQ5VZV4 182 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 CLUHP3Q96NS8 147 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 PBDC1Q9BVG4 233 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 HSPB7Q9UBY9 170 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 TMED3Q9Y3Q3 217 aa9.77□□□□□ -0.85
SMARCD3-211ENST00000485592 TRAV6A0A075B6T7 132 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 LOC102723971A0A1B0GUV8 181 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 ADAP1O75689 374 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 DAD1P61803 113 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 OR8G2PQ6IF36 304 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 TMEM88Q6PEY1 159 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 ZNF709Q8N972 641 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 YTHDF2Q9Y5A9 579 aaKnown RBP9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
SMARCD3-211ENST00000485592 SLC25A6P12236 298 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 DEFB1P60022 68 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 PSG9Q00887 426 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 GGNBP1Q5YKI7 109 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 EBLN2Q6P2I7 272 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 KRTAP4-5Q9BYR2 181 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 SLC35B3Q9H1N7 401 aa9.75□□□□□ -0.85
SMARCD3-211ENST00000485592 ZFP92A6NM28 416 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 HOXB5P09067 269 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 SAMD13Q5VXD3 122 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 GSG1LQ6UXU4 331 aa9.74□□□□□ -0.85
SMARCD3-211ENST00000485592 MITD1Q8WV92 249 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms