RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 IGLV2-18A0A075B6J9 118 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 IGKV2-28A0A075B6P5 120 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 PGLYRP1O75594 196 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 NCR2O95944 276 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 IGKV2D-28P01615 120 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 MT-ND4LP03901 98 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 METTL15P1P0C7V9 234 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 RPS25P62851 125 aaKnown RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 DYNLT1P63172 113 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 EIF4EBP1Q13541 118 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 TMEM244Q5VVB8 128 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 OR4B1Q8NGF8 309 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 OR5H6Q8NGV6 325 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 NAT14Q8WUY8 206 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 PRELID3AQ96N28 172 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 LINC00470Q9BZP3 86 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 R4GN34 69 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 HSPE1-MOB4S4R3N1 261 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 VIRMAQ69YN4 1812 aaKnown RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF518AQ6AHZ1 1483 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 PIK3C2AO00443 1686 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 NUP214P35658 2090 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 TRPM3Q9HCF6 1732 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-214ENST00000483925 UBR2Q8IWV8 1755 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 DOCK6Q96HP0 2047 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 TUBGCP6Q96RT7 1819 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 IGHV3-64A0A075B6Q5 118 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 A0A0J9YX75 114 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 A8MWV9 139 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 K7ERJ3 54 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 RER1O15258 196 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 IFNGP01579 166 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 GPX1P07203 203 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 KDELR1P24390 212 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 RAB5CP51148 216 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 COPZ1P61923 177 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 NEDD8Q15843 81 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 FAM27BQ5VT28 67 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 C7orf65Q6ZTY9 151 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 AAED1Q7RTV5 226 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 RNF182Q8N6D2 247 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 TEX29Q8N6K0 151 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 AQP3Q92482 292 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 MRPS24Q96EL2 167 aaKnown RBP2.61□□□□□ -1.99
PTCD3-214ENST00000483925 ZC2HC1AQ96GY0 325 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 SLIT3O75094 1523 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 MAST2Q6P0Q8 1798 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 ECM29Q5VYK3 1845 aa2.61□□□□□ -1.99
PTCD3-214ENST00000483925 RIMBP3CA6NJZ7 1639 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 RIMBP3BA6NNM3 1639 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 RIMBP3Q9UFD9 1639 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 PTPRGP23470 1445 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 NUP205Q92621 2012 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 IGHV1-18A0A0C4DH31 117 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 A8MU10 97 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 TIMM17BO60830 172 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 MT-ND6P03923 174 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 CRYGSP22914 178 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 LSM3P62310 102 aaKnown RBP2.6□□□□□ -1.99
PTCD3-214ENST00000483925 EMX2Q04743 252 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 KLRD1Q13241 179 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 HSD17B12Q53GQ0 312 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 CTAGE3PQ8IX95 158 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 MORN4Q8NDC4 146 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 WFDC11Q8NEX6 87 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 CMTM2Q8TAZ6 248 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 GGACTQ9BVM4 153 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 BCL2L10Q9HD36 194 aa2.6□□□□□ -1.99
PTCD3-214ENST00000483925 MARCOQ9UEW3 520 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-214ENST00000483925 TNS3Q68CZ2 1445 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 PRG4Q92954 1404 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ADGRL1O94910 1474 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ATG2BQ96BY7 2078 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 DOCK9Q9BZ29 2069 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 FAM135AQ9P2D6 1515 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF106Q9H2Y7 1883 aaKnown RBP2.59□□□□□ -1.99
PTCD3-214ENST00000483925 OR2T8A6NH00 312 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 G3V3Q6 166 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF705BP0CI00 300 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-214ENST00000483925 QRFPP83859 136 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF90Q03938 601 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 LY6EQ16553 131 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 TMEM155Q4W5P6 130 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 LCN15Q6UWW0 184 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 C3orf56Q8N813 242 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 CYYR1Q96J86 154 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 TCEAL7Q9BRU2 100 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 BANF2Q9H503 90 aa2.59□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF646O15015 1829 aaPredicted RBP2.58□□□□□ -2
PTCD3-214ENST00000483925 DENND4CQ5VZ89 1909 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 RIMS1Q86UR5 1692 aaKnown RBP2.58□□□□□ -2
PTCD3-214ENST00000483925 OR51F1A6NGY5 319 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 GNG7O60262 68 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 CLPSP04118 112 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 IGLC6P0CF74 106 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 CRYGAP11844 174 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms