RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FAM219AQ8IW50 185 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 ARRDC1Q8N5I2 433 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 OR11H7Q8NGC8 314 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 RBPMSQ93062 196 aaKnown RBP8.93□□□□□ -0.98
UBR4-213ENST00000483922 DOK5Q9P104 306 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 SMIM31A0A1B0GVY4 71 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 CBY3A6NI87 242 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 PRB4P10163 310 aaPredicted RBP8.92□□□□□ -0.98
UBR4-213ENST00000483922 BTF3P20290 206 aaKnown RBP8.92□□□□□ -0.98
UBR4-213ENST00000483922 CNN1P51911 297 aaKnown RBP8.92□□□□□ -0.98
UBR4-213ENST00000483922 CCL18P55774 89 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 OR2F1Q13607 317 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 FAAP20Q6NZ36 180 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 TMEM182Q6ZP80 229 aaPredicted RBP8.92□□□□□ -0.98
UBR4-213ENST00000483922 BAP18Q8IXM2 172 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 RNASE11Q8TAA1 199 aaKnown RBP8.92□□□□□ -0.98
UBR4-213ENST00000483922 ZFAND1Q8TCF1 268 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 MTFP1Q9UDX5 166 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 TMEM56-RWDD3S4R434 201 aa8.92□□□□□ -0.98
UBR4-213ENST00000483922 TRAV12-2A0A075B6T6 113 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 TSPOP30536 169 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 LYZP61626 148 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 NCS1P62166 190 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 DLK1P80370 383 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 ESRGQ1W209 222 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 TMEM268Q5VZI3 342 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
UBR4-213ENST00000483922 LYPD1Q8N2G4 141 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 CCDC71LQ8N9Z2 235 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 TMEM208Q9BTX3 173 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 SLC25A32Q9H2D1 315 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 RBKSQ9H477 322 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 NAA60Q9H7X0 242 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 RPRMQ9NS64 109 aa8.91□□□□□ -0.98
UBR4-213ENST00000483922 DNAH8Q96JB1 4490 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 ZFP92A6NM28 416 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 OR8I2Q8N0Y5 310 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 RNF182Q8N6D2 247 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 TMEM229BQ8NBD8 167 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 C16orf92Q96LL3 132 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 RSG1Q9BU20 258 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 Q9H3A6 140 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 HSPB7Q9UBY9 170 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 GPR132Q9UNW8 380 aa8.9□□□□□ -0.98
UBR4-213ENST00000483922 UBR4Q5T4S7 5183 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 CRYM-AS1A6NIL9 109 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 SNRPGP15A8MWD9 76 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 B3GALNT1O75752 331 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 ATP5G1P05496 136 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 GPX4P36969 197 aaPredicted RBP8.89□□□□□ -0.99
UBR4-213ENST00000483922 ATP5G3P48201 142 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 VBP1P61758 197 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 LGI3Q8N145 548 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 SLC25A39Q9BZJ4 359 aaPredicted RBP8.89□□□□□ -0.99
UBR4-213ENST00000483922 U3KQ87 197 aa8.89□□□□□ -0.99
UBR4-213ENST00000483922 ZNF98A6NK75 572 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 RAB3DO95716 219 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 TBPP20226 339 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 HOXA5P20719 270 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 GATA2P23769 480 aaPredicted RBP8.88□□□□□ -0.99
UBR4-213ENST00000483922 NUP62P37198 522 aaPredicted RBP8.88□□□□□ -0.99
UBR4-213ENST00000483922 STEAP1BQ6NZ63 245 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 DTD1Q8TEA8 209 aa8.88□□□□□ -0.99
UBR4-213ENST00000483922 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 ATP6V1G2O95670 118 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 INSP01308 110 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 SULT1A3P0DMM9 295 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 SULT1A4P0DMN0 295 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 NOXA1Q86UR1 476 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 OR4C16Q8NGL9 310 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 TRGV9Q99603 122 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 UPK3BQ9BT76 320 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 SLC25A22Q9H936 323 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 ZNF586Q9NXT0 402 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
UBR4-213ENST00000483922 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
UBR4-213ENST00000483922 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 CLINT1Q14677 625 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 GPR107Q5VW38 600 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 GPR141Q7Z602 305 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 LINC00612Q8N6U2 182 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 LINC01587Q99440 93 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 FUNDC2Q9BWH2 189 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 MIXL1Q9H2W2 232 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 NOP10Q9NPE3 64 aaKnown RBP8.86□□□□□ -0.99
UBR4-213ENST00000483922 EXTL2Q9UBQ6 330 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
UBR4-213ENST00000483922 A0A0J9YY99 117 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 FAM25AB3EWG3 89 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 FAM25CB3EWG5 89 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 FAM25GB3EWG6 89 aa8.85□□□□□ -0.99
UBR4-213ENST00000483922 ZNF701M0R085 212 aaPredicted RBP8.85□□□□□ -0.99
UBR4-213ENST00000483922 DUSP14O95147 198 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms