RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 C1orf158Q8N1D5 194 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 NEU1Q99519 415 aa12.86□□□□□ -0.35
ATG4B-221ENST00000483778 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 WRBO00258 174 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 AMBPP02760 352 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 PRM2P04554 102 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 HOXB5P09067 269 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 PSMB3P49720 205 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 PPP1R1AQ13522 171 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 FAM78BQ5VT40 261 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 FOXI2Q6ZQN5 318 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
ATG4B-221ENST00000483778 M0R2N4 97 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 SFT2D2O95562 160 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 SLC25A6P12236 298 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 ID1P41134 155 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 CENPSQ8N2Z9 138 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 PPP1R14BQ96C90 147 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 CLUHP3Q96NS8 147 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 RSG1Q9BU20 258 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 DNAH17Q9UFH2 4485 aa12.84□□□□□ -0.35
ATG4B-221ENST00000483778 A0A0J9YX75 114 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 SYNGR2O43760 224 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 RAB11AP62491 216 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 GGNBP1Q5YKI7 109 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 COQ8AQ8NI60 647 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 DKK2Q9UBU2 259 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
ATG4B-221ENST00000483778 FAT2Q9NYQ8 4349 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 A0A1B0GVY2 172 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 ZNF98A6NK75 572 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 H3BP45 60 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 ISLRO14498 428 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 FAUP35544 74 aaKnown RBP12.82□□□□□ -0.36
ATG4B-221ENST00000483778 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-221ENST00000483778 PAX9P55771 341 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 PSG9Q00887 426 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 NDUFAF3Q9BU61 184 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 KIAA1109Q2LD37 5005 aa12.82□□□□□ -0.36
ATG4B-221ENST00000483778 RTL8CO15255 209 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 ADAP1O75689 374 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 FABP1P07148 127 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-221ENST00000483778 ORM2P19652 201 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 TMED3Q9Y3Q3 217 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
ATG4B-221ENST00000483778 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 A8MTW9 85 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
ATG4B-221ENST00000483778 MED6O75586 246 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 C16orf92Q96LL3 132 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-221ENST00000483778 FLVCR2Q9UPI3 526 aa12.8□□□□□ -0.36
ATG4B-221ENST00000483778 MUC4Q99102 2169 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 CCNKO75909 580 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 HTN3P15516 51 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 AP3S2P59780 193 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 EBLN2Q6P2I7 272 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 NIPSNAP3BQ9BS92 247 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 RPRMQ9NS64 109 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 DOK5Q9P104 306 aa12.79□□□□□ -0.36
ATG4B-221ENST00000483778 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 P0DMU3 169 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 POLR2GP62487 172 aaKnown RBP eCLIP12.78□□□□□ -0.36
ATG4B-221ENST00000483778 ID3Q02535 119 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 ACOT7LQ6ZUV0 252 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 OR1B1Q8NGR6 318 aa12.78□□□□□ -0.36
ATG4B-221ENST00000483778 CIB3Q96Q77 187 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-221ENST00000483778 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
ATG4B-221ENST00000483778 C9orf170A2RU37 121 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 GALR1P47211 349 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 BAK1Q16611 211 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 C7orf50Q9BRJ6 194 aaKnown RBP12.77□□□□□ -0.37
ATG4B-221ENST00000483778 GOLT1BQ9Y3E0 138 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
ATG4B-221ENST00000483778 PKHD1P08F94 4074 aa12.77□□□□□ -0.37
ATG4B-221ENST00000483778 IGLV2-18A0A075B6J9 118 aa12.76□□□□□ -0.37
ATG4B-221ENST00000483778 ZNF705GA8MUZ8 300 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms