RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CSNK1G2-AS1Q8NCQ2 148 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 OR1S2Q8NGQ3 325 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 RAB40CQ96S21 281 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 FNDC4Q9H6D8 234 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-207ENST00000483407 COPZ2Q9P299 210 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 CELA1Q9UNI1 258 aa4.21□□□□□ -1.74
CSDE1-207ENST00000483407 HECTD4Q9Y4D8 3996 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 C3orf85A0A1B0GTC6 90 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 FAM90A26D6RGX4 464 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 RTL8CO15255 209 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 B3GALNT1O75752 331 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 IGKV1-17P01599 117 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 APOA1P02647 267 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 P0C879 139 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 IGLC1P0CG04 106 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 SPART-AS1P0CW21 52 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 SLC25A4P12235 298 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-207ENST00000483407 RND2P52198 227 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 SPCS3P61009 180 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 TIGITQ495A1 244 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 RNASE10Q5GAN6 216 aaKnown RBP4.2□□□□□ -1.74
CSDE1-207ENST00000483407 ETFRF1Q6IPR1 90 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 CCDC190Q86UF4 302 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 FAM219AQ8IW50 185 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 ARRDC1Q8N5I2 433 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 CCDC71LQ8N9Z2 235 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 ZFAND1Q8TCF1 268 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
CSDE1-207ENST00000483407 FAM210BQ96KR6 192 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 TP53RKQ96S44 253 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 VCX3AQ9NNX9 186 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 NRN1Q9NPD7 142 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 MRPL36Q9P0J6 103 aaKnown RBP4.2□□□□□ -1.74
CSDE1-207ENST00000483407 COMMD3Q9UBI1 195 aa4.2□□□□□ -1.74
CSDE1-207ENST00000483407 IGLV2-18A0A075B6J9 118 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 IGHV3OR16-12A0A075B7B8 117 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 SMIM9A6NGZ8 99 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 H3BMM0 161 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 ATP6V1G2O95670 118 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 IL4P05112 153 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 HLA-DRB4P13762 266 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 TBPP20226 339 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 UCP1P25874 307 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 OR10J1P30954 320 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 TGFBR1P36897 503 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-207ENST00000483407 EMP1P54849 157 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 YPEL3P61236 119 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-207ENST00000483407 LSM3P62310 102 aaKnown RBP4.19□□□□□ -1.74
CSDE1-207ENST00000483407 DHODHQ02127 395 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 TWIST1Q15672 202 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 BSXQ3C1V8 233 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 SP6Q3SY56 376 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 SIGLEC15Q6ZMC9 328 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 LHFPL1Q86WI0 220 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 SLC24A4Q8NFF2 622 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 OR52E5Q8NH55 327 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 RNASEH2CQ8TDP1 164 aaKnown RBP4.19□□□□□ -1.74
CSDE1-207ENST00000483407 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-207ENST00000483407 CACFD1Q9UGQ2 172 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 RFNGQ9Y644 331 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 HLA-DRB4X5D2U9 266 aa4.19□□□□□ -1.74
CSDE1-207ENST00000483407 A0A0G2JRQ6 117 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 CEBPZOSA8MTT3 80 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 ZNF705FA8MVS1 300 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 FAM25AB3EWG3 89 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 FAM25CB3EWG5 89 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 FAM25GB3EWG6 89 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 BUB3O43684 328 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 TNFAIP8O95379 198 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 TOMM40O96008 361 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 CD74P04233 296 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 CD3DP04234 171 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 ZNF705DP0CH99 300 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 ZNF705BP0CI00 300 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 RD3LP0DJH9 198 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 VPREB1P12018 145 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 ID1P41134 155 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 AMTP48728 403 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 USF2Q15853 346 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 RNF212Q495C1 297 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 SCGB2B2Q4G0G5 96 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 C2orf83Q53S99 150 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 C1orf134Q5TEV5 83 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 PRSS54Q6PEW0 395 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 ZNF705AQ6ZN79 300 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 LINC00052Q96N35 136 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 SCRT1Q9BWW7 348 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 C14orf166Q9Y224 244 aaKnown RBP4.18□□□□□ -1.74
CSDE1-207ENST00000483407 GOLT1BQ9Y3E0 138 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 DNAH10Q8IVF4 4471 aa4.18□□□□□ -1.74
CSDE1-207ENST00000483407 A0A087WXM4 84 aa4.17□□□□□ -1.74
CSDE1-207ENST00000483407 TEX13DA0A0J9YY54 714 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-207ENST00000483407 HPGDSO60760 199 aa4.17□□□□□ -1.74
CSDE1-207ENST00000483407 GAGE7O76087 117 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms