RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LGI3Q8N145 548 aa9.91□□□□□ -0.82
VARS-226ENST00000483275 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
VARS-226ENST00000483275 OR52E5Q8NH55 327 aa9.91□□□□□ -0.82
VARS-226ENST00000483275 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
VARS-226ENST00000483275 C7orf50Q9BRJ6 194 aaKnown RBP9.91□□□□□ -0.82
VARS-226ENST00000483275 HSPG2P98160 4391 aa9.91□□□□□ -0.82
VARS-226ENST00000483275 VAMP1P23763 118 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 AP2S1P53680 142 aaPredicted RBP9.9□□□□□ -0.82
VARS-226ENST00000483275 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 OR4B1Q8NGF8 309 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 CACFD1Q9UGQ2 172 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 TMEM56-RWDD3S4R434 201 aa9.9□□□□□ -0.82
VARS-226ENST00000483275 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 IL7P13232 177 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 NKX2-1P43699 371 aaPredicted RBP9.89□□□□□ -0.83
VARS-226ENST00000483275 LYZP61626 148 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 ZNF90Q03938 601 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 CNPY1Q3B7I2 92 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 LGALS9BQ3B8N2 356 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 NMSQ5H8A3 153 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 Q6ZR54 194 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 S100ZQ8WXG8 99 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 SAV1Q9H4B6 383 aaPredicted RBP9.89□□□□□ -0.83
VARS-226ENST00000483275 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
VARS-226ENST00000483275 IGKV1D-37A0A075B6S9 117 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 A0A0B4J2A0 478 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 A6NHS1 94 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 IFNA21P01568 189 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 PRM2P04554 102 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 CCR6P51684 374 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 OR2F1Q13607 317 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 TMEM88Q6PEY1 159 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 LINC00299Q6ZSB3 139 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 COQ8AQ8NI60 647 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 NEU1Q99519 415 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 RBKSQ9H477 322 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 BATF3Q9NR55 127 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 SHPKQ9UHJ6 478 aa9.88□□□□□ -0.83
VARS-226ENST00000483275 LOC102723971A0A1B0GUV8 181 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 DUXBA0A1W2PPF3 345 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 SOCS3O14543 225 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 NDUFB6O95139 128 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 SFT2D2O95562 160 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
VARS-226ENST00000483275 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 C1orf158Q8N1D5 194 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 C20orf173Q96LM9 149 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 SDHCQ99643 169 aaPredicted RBP9.87□□□□□ -0.83
VARS-226ENST00000483275 NIPSNAP3BQ9BS92 247 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 CCDC32Q9BV29 185 aa9.87□□□□□ -0.83
VARS-226ENST00000483275 YTHDF2Q9Y5A9 579 aaKnown RBP9.87□□□□□ -0.83
VARS-226ENST00000483275 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 UBE2MP61081 183 aaKnown RBP9.86□□□□□ -0.83
VARS-226ENST00000483275 SMCO1Q147U7 214 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 FAM78BQ5VT40 261 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 FOXI2Q6ZQN5 318 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 LYZL2Q7Z4W2 148 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 DTD1Q8TEA8 209 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 SEPSECSQ9HD40 501 aaKnown RBP9.86□□□□□ -0.83
VARS-226ENST00000483275 PTTG2Q9NZH5 202 aa9.86□□□□□ -0.83
VARS-226ENST00000483275 SMIM9A6NGZ8 99 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 LYRM1O43325 122 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 PRB4P10163 310 aaPredicted RBP9.85□□□□□ -0.83
VARS-226ENST00000483275 PSMB3P49720 205 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 GAMTQ14353 236 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 PPP1R14BQ96C90 147 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 HSPB7Q9UBY9 170 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 GOLT1BQ9Y3E0 138 aa9.85□□□□□ -0.83
VARS-226ENST00000483275 HBE1P02100 147 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 IAPPP10997 89 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 PSG9Q00887 426 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 ZNF846Q147U1 533 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 OR8G2PQ6IF36 304 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 SLC35E1Q96K37 410 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 PAIP2BQ9ULR5 123 aaKnown RBP9.84□□□□□ -0.83
VARS-226ENST00000483275 TMED3Q9Y3Q3 217 aa9.84□□□□□ -0.83
VARS-226ENST00000483275 A0A0J9YX75 114 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 ZNF705GA8MUZ8 300 aaPredicted RBP9.83□□□□□ -0.84
VARS-226ENST00000483275 HOXB5P09067 269 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 ID1P41134 155 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 DAD1P61803 113 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 C1orf134Q5TEV5 83 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 MZT2BQ6NZ67 158 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 OR8I2Q8N0Y5 310 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 LRTM2Q8N967 370 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 SLC25A32Q9H2D1 315 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 SLC25A22Q9H936 323 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 FLVCR2Q9UPI3 526 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 U3KQ87 197 aa9.83□□□□□ -0.84
VARS-226ENST00000483275 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
VARS-226ENST00000483275 C9orf170A2RU37 121 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms